Oxyplasma meridianum: OXIME_001369
Help
Entry
OXIME_001369 CDS
T10514
Name
(GenBank) ribosome biogenesis/translation initiation ATPase RLI
KO
K06174
ATP-binding cassette, sub-family E, member 1
Organism
omr Oxyplasma meridianum
Brite
KEGG Orthology (KO) [BR:
omr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
omr03009
]
OXIME_001369
Ribosome biogenesis [BR:
omr03009
]
Eukaryotic type
Pre-40S particles
Other pre-40S particles
OXIME_001369
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
SMC_N
AAA_21
Fer4_RLI
Fer4
AAA_23
Fer4_9
Fer4_6
RsgA_GTPase
Fer4_21
AAA_15
Fer4_10
AAA_29
Fer4_7
LdpA_Fe-S-bd
Fer4_2
AAA_24
Fer4_16
Rad17
Fer4_3
DUF1670
SRP54
DnaB_C
Fer4_8
Fer4_17
Motif
Other DBs
NCBI-ProteinID:
WYY00785
UniProt:
A0AAX4NI78
LinkDB
All DBs
Position
1302760..1304532
Genome browser
AA seq
590 aa
AA seq
DB search
MHIAVLDRERCHPKKCHHECQFYCPPVRSGTPTIEFPVESEQPVITEALCIGCGICVHRC
PFGAIKIVSVPDEMNKEIFHQYGMNSFRLYSIPTIAHGKVTAILGPNGMGKTTTINILAG
ITVPNFGNYDKGGSKEDLLDRLSGTVMGDYFDALYSGEKKAVIKTQYIDLIPKAVRGKIG
EILKKNDQTGNFDLVSSQLNLEGSLEKDVESCSGGELQKFAIATALLKDADIYLMDEMSS
YLDIRERVNVANTIQKLAAKKTVMIVEHDLAILDWMADNVHLVYGQSGVFGVIVDPKTTN
KAINSFLSGYLREENVRIRNYAIDFQEKSQKRTSTGQTLIKWMDLTKKLGDFTIHVNPGE
IKSGQVIGVLGRNALGKTTMMKILAGVLKPDTGSVDENIRIAYKPQYISTDFDGTVEDLV
LSSLKELAASGFVKNEILKPLDIEDMYSLNVGDLSGGELQRLSIALTLCRDADLYLMDEP
SAHLDSVYRMAAAKIIRRVMEANKKSALIVDHDIYLIDLISDNLMVFSGIPGVNGSTYGP
TNMKDGMNRFLSEVGITFRRDETTHRPRINKLDSALDREQKTSGNYYYSS
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atgcatattgcagttcttgacagggaaaggtgccatccaaaaaaatgccatcatgaatgc
cagttttactgccctccagtcagaagtggcacccctacaatagagttccctgtagagagc
gaacagccggttataactgaagcgctctgcataggatgcggaatctgcgtccaccgatgc
ccctttggggccataaagatcgtctcagttcccgatgagatgaacaaggagatattccac
caatacggaatgaactcgtttaggctttattccatcccgacaatagcacatgggaaggta
acggcaatactcgggcccaatggaatggggaaaaccacgacaataaacatactggccggg
ataaccgtaccaaatttcggtaattatgataaaggcggttccaaggaggatttgctagat
agactttctgggaccgttatgggagactactttgatgccctttattccggagagaaaaag
gctgtcataaaaacacagtatattgaccttattccaaaggcagtcagggggaagatcgga
gagatcctgaagaagaatgaccagacagggaattttgatctggtttcatcacagctgaat
ctcgagggatcacttgaaaaggatgttgaaagctgttcgggtggtgaactgcaaaaattt
gcaattgccaccgcacttctaaaggatgcggacatctatcttatggatgagatgtcgtca
tacctggatatcagagaaagggtcaatgtggcaaacaccatacagaaacttgccgcaaag
aagactgttatgatagtggaacatgatcttgcaatacttgactggatggctgataacgtc
catcttgtctacggtcagagcggagtttttggggttattgttgatccgaaaacaaccaac
aaggcaataaactcatttctttccggctatctcagggaagagaacgtaagaatcaggaac
tatgccatagatttccaggaaaaatcccagaagaggaccagcacagggcagacattgata
aaatggatggatcttacaaaaaagcttggagatttcactattcatgtcaatccgggagaa
attaaatccgggcaggtcattggtgtgcttggcagaaatgctttgggaaagacaaccatg
atgaaaatattggcaggtgtcctcaagcctgatacaggctctgttgatgaaaatataagg
atagcctacaagccgcaatacatatcaaccgattttgatggaacagttgaagatctggtt
ttatcatccctgaaggaactagcagccagcggttttgttaagaatgagatcttaaagcca
cttgatatcgaggacatgtacagccttaatgtgggcgatctttccggcggtgagctgcag
aggctttccattgcccttacactatgcagagacgcggacctttacctcatggatgaaccc
tcagcacatctggatagcgtttacaggatggcagctgcaaagatcataagaagagtcatg
gaggccaacaagaagagtgcccttattgttgatcatgacatatatctcatagacctcatt
tctgataacctgatggttttctccggaattcccggagtgaatgggagtacatacggccct
accaatatgaaagatggaatgaacagatttctgtctgaagtggggataacattcaggaga
gatgaaacgacccacagaccaaggataaacaagctggatagcgcactggacagggaacag
aagacttcaggaaattattactattcctcatga
DBGET
integrated database retrieval system
