Oncorhynchus mykiss (rainbow trout): 100135797
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Entry
100135797 CDS
T07259
Symbol
ddx4
Name
(RefSeq) probable ATP-dependent RNA helicase DDX4
KO
K13982
probable ATP-dependent RNA helicase DDX4 [EC:
5.6.2.7
]
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
omy03036
]
100135797 (ddx4)
Enzymes [BR:
omy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
100135797 (ddx4)
Chromosome and associated proteins [BR:
omy03036
]
Eukaryotic type
Gene silencing
piRNA pathway
100135797 (ddx4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Utp25_C
CCDC154
Motif
Other DBs
NCBI-GeneID:
100135797
NCBI-ProteinID:
NP_001117665
Ensembl:
ENSOMYG00000032304
UniProt:
Q9PT10
LinkDB
All DBs
Position
5:complement(10318236..10330434)
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AA seq
647 aa
AA seq
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MDNWDEVTTSNESGLSSWTSGGQSSSFGRPTDKVSSWNSGCGGFGGGRGRGSRGGGGDFK
SFSSGAGENGNEDKDSSWNSGGGFRGRGRGGGRGSRGGGIRNGDDGYDGGFGGSQGGRGG
RGGFRSGGGDGGGFGGGGYRGRDEEIFSKGSTMDGGGDGGNPGPPKVTYVPEALCEKESS
IFAHYESGINFDKYDDILVDVSGSNPPKAIMGFEEAALCESLNRNISKSGYKKPTPVQKH
GIPIIAAGRDLMACAQTGSGKTAAFLLPILQQLMVDGVAASQFSEIQEPEVIIVAPTREL
INQIYMEARKFAHGTCVRPVVVYGGISTGHTIREILKGCNVLCATPGRLMDIIGRGKIGL
SKLRYLVLDEADRMLDMGFEPAMRKLVGSPGIPAKEDRQTLMFSATYPEDIQKLAADFLK
KDYLFLAVGVVGGACSDVEQVVVQVTKFSKRDQLLEVLKTTGSERTMVFVETKRQADFIA
TFLCREKVNTTSIHGDREQREREQALGDFRSGRCPVLVATSVAARGLDIKDVQHIVNFDL
PNNIDEYVHRIGRTGRCGNTGRAVCFFDPGADGNLARSLVKVLSGAQQEVPKWLEEAAFS
AHGTTGFNPGGRTFASTDSRKGGSLQRDGASHLAAALSSGADDDEWE
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atggacaactgggatgaggttaccacaagtaatgaaagtggattgagctcgtggaccagt
ggtggccaaagttccagttttgggagaccgactgataaagtcagctcctggaacagtgga
tgtggtggctttggtggcggcagaggccgagggtccaggggaggtggtggagacttcaag
agtttctcttcaggagctggtgagaatgggaatgaagataaagacagctcctggaacagt
ggtggaggcttcaggggaagaggcagagggggcggcagaggatcaaggggaggaggcatc
cgaaatggggatgacggctatgacggcgggtttggaggtagccagggaggcagaggtggc
aggggaggcttccggtcaggtggtggtgatggtggaggatttggcggaggaggttatcgt
ggacgagatgaagaaattttctctaaaggctcaaccatggatggtggtggagatggtggc
aatccaggtcccccaaaggtgacctatgtgcccgaagccctctgtgagaaggagtcgtct
atttttgctcattatgagtcaggcatcaactttgataagtacgatgacatcttggtcgat
gtcagcggcagcaatccgccaaaggcaatcatgggttttgaagaggctgccctgtgtgaa
tctctgaacaggaacatcagtaagtctggctataagaagcccaccccagtacagaagcat
ggcattcccatcatcgctgctggccgggacctcatggcctgtgcccagactggatctggg
aaaacggctgcattcttactgcccatcctgcagcagctgatggtggacggcgtggcagct
agtcagttcagcgagatccaggagccagaggttattatagtggccccaaccagggagctg
atcaaccagatctacatggaagcccggaagtttgcccatgggacttgtgtgcgtcctgtg
gtggtttacggtggcataagcaccggtcacaccattcgcgagatactgaagggctgcaat
gtgctgtgtgcgactccaggaagactgatggacattattggaagaggaaagattggcttg
agcaagctgcgttacctggtgctggacgaggctgacaggatgctggacatgggctttgag
cctgcgatgcgcaagctggtggggtccccaggcataccagctaaagaggatcgccagacc
cttatgttcagcgctacctaccccgaggacatccaaaaactggctgctgacttcctgaag
aaggactatctgttccttgctgtgggtgtggtgggcggagcctgcagtgatgtggagcag
gtcgtggttcaggtgaccaagttctccaaaagagaccaactactggaggtcctgaagact
acagggtctgaacgcacaatggtctttgtggaaaccaagaggcaggctgactttatagca
acgttcctgtgtcgggagaaggttaatactactagtattcacggtgaccgtgagcagagg
gagcgtgaacaggcgctcggcgacttccgctccggaaggtgtcctgtcctggtggccacc
tctgttgctgcccgcggactggacatcaaggatgtccaacacatagtcaactttgacctc
cccaacaacattgatgagtacgtccaccgcatcgggagaacaggtcgctgtgggaacacc
gggagagctgtgtgtttctttgacccgggggctgacggcaacctggcgcgctccctggtc
aaagtcttgtctggggcccagcaggaggtgcccaaatggctggaggaagctgccttcagt
gctcatggcaccacagggttcaacccaggtggcagaacctttgcctccactgatagcagg
aagggtggctctcttcagagagatggggcaagtcatctagctgctgccctgagcagtggc
gcagacgacgacgaatgggagtga
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