Oncorhynchus mykiss (rainbow trout): 100135798
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Entry
100135798 CDS
T07259
Name
(RefSeq) ubiquitin
KO
K02927
ubiquitin-large subunit ribosomal protein L40e
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy03010
Ribosome
omy04120
Ubiquitin mediated proteolysis
omy04137
Mitophagy - animal
omy04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
100135798
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
100135798
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
100135798
04137 Mitophagy - animal
100135798
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
omy03011
]
100135798
04121 Ubiquitin system [BR:
omy04121
]
100135798
Ribosome [BR:
omy03011
]
Ribosomal proteins
Eukaryotes
Large subunit
100135798
Archaea
100135798
Ubiquitin system [BR:
omy04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
100135798
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ubiquitin
Ribosomal_L40e
Rad60-SLD
Ubiquitin_2
Rad60-SLD_2
DUF2604
Ubiquitin_5
zf-C4pol
TBK1_ULD
OTU1_UBXL
Dsc3_N
UBL_UBAC1
Motif
Other DBs
NCBI-GeneID:
100135798
NCBI-ProteinID:
NP_001117666
Ensembl:
ENSOMYG00000000730
UniProt:
Q9PT09
LinkDB
All DBs
Position
1:16826020..16827539
Genome browser
AA seq
128 aa
AA seq
DB search
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGIIEPSLRQLAQKYNCDKMICRKCYARLHPRAVNCRKKKCGHTNN
LRPKKKLK
NT seq
387 nt
NT seq
+upstream
nt +downstream
nt
atgcagatttttgtgaagacgttgacggggaaaaccatcacccttgaggttgagcccagc
gatactattgaaaatgtcaaggccaagatccaggataaggaaggcattccacctgatcaa
cagcgtctgatcttcgctggcaaacaacttgaggatggtcgcaccttgtcagactacaac
atccagaaagagtccacccttcatcttgtgctgcgtcttcgtggaggcattatcgagcca
tctttgagacagctggcccagaagtacaactgtgacaaaatgatctgccgcaagtgctac
gctcgcctccatcctcgtgctgtcaactgccgcaagaagaagtgtggacacacaaacaac
ctgcgccccaagaagaagctgaagtag
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