KEGG   Oncorhynchus mykiss (rainbow trout): 100135905
Entry
100135905         CDS       T07259                                 
Symbol
per1b
Name
(RefSeq) period circadian protein homolog 1b isoform X1
  KO
K21944  period circadian protein 1
Organism
omy  Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:omy00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:omy03400]
    100135905 (per1b)
DNA repair and recombination proteins [BR:omy03400]
 Eukaryotic type
  Check point factors
   Other check point factors
    100135905 (per1b)
SSDB
Motif
Pfam: Period_C Per3-like_PAS-A bHLH_PER PAS_3 PAS_11 PAS
Other DBs
NCBI-GeneID: 100135905
NCBI-ProteinID: XP_021433970
Ensembl: ENSOMYG00000025403
UniProt: A0A8C7RPQ0
LinkDB
Position
21:57970308..57986158
AA seq 1366 aa
MSYDDSNSAPGDDTWGRVGSTNEEEEEAGTGLSSPGSNNNHGSQSGTSDLANRVRGSSPS
GSGSGGSSGGDQRGPSSDDGERESSEGGGGSRGHQSRSSHCSSSQKDSGMMLENTESNKS
SQSQSPSPPSSSLAYSLLSASSEQDPLSTSGCSSNEQHQTARVQTQKEMLKALKELKVRL
PAECKGKGRSSTLDALQYALNCVKQVRANQEYYHQWSVEECHGCSLDLSAHTTEELDNIA
SEYTLKNTDTFSMAVSFLTGKVVYISPQGSSLLRCKPERLQGAIFSELLAPQDVSTFYSS
TAPCRLPAWATCMGSVSPRTDCHQGKSMFCRISADRAQGGEIKYYPFRMTPYQLTLRDLD
TSDPQPCCLLISERVQSGYEAPRIPADKRIFSTSHTPSCLFQEVDERAVPLLGYLPQDLV
GSPVLLYLHPEDRPIMVAIHRKILQSAGQPFDSSPMRMCARSGEYVTIDTSWSSFINPWS
RKVAFIVGRHKVRTSPLNEDVFTPLRGCEGRPVAPEIVRLSEQIHRLLVQPVHSGGSQGY
SSLTSNGSCSHEQRYRRTASSASDSKSTNAMEAMEAAVVALHKPMTFQQICKDVYMVKTS
GQQVFINSHNRALSRRHAVTALRATGEVEPIRSLIPEVACPSKTPVFNTQQLMKEEPPSA
YSYQQINCLDSIIRFLDGCNVKRKFGSSSTTSTSDGEKQQQETAGNEKGGPATSVTLVGD
SAGVPPLAMHSHKAKSVASVTSQCSFSSTIVHVGDKKPPESDVVMENAPPTPMPATPTTT
RSPPTAIINPPPLKTTSPPSRRGGGLTKEVLSAHTQQEEQAFLCRFSDLSQLRVIAPSSA
LRCPLPNTNPRRRRACSPDYPAAGGSSGRRGAKRLKQQESSEQRCPLALGLTGPLRSPNV
VPMNSPPSSTYTLPMMPLGPPTTSSWPVSVGSQASLPSVPYPSGTLPLYPIYPPLSQPIQ
NQMVPPMMALVLPNYMFPQLHPNLPQMTTAMNTMGSPMPQPGAAMVTPGPQQFFNPSAGF
PFPGTNVMPCPMPTMPSLMQTAMPIQTQRPASGSSTPQSCSQVPVDQEGAESPLFHSRCS
SPLNLLQLVEESPRNRLEIATALAASAQQATIPSQGTQGRSPDDSKENANDSNQDGESTP
SDLLDLLLQEDSRSGSASSGSGSDSLGTVSNGCSSSGSGTSRSRSSRTSKYFGSIDSSEN
DHSRKQPAGGSRAGGDGEEQLIKCVLQDPIWLLMANTDHKVMMTYQLPTKDRETVLRQDR
EALRAMHKHQPRFTEDQKRELSQVHPWIRTGRLPRAINVSACMGCKSSPLPESTVDQGGD
ARREEEEHAAHSETQGNDQEMTTEEQEVTWPTGEKKARAGETYMTH
NT seq 4101 nt   +upstreamnt  +downstreamnt
atgagttacgacgactcaaactccgcccctggcgatgacacttgggggcgagtgggaagc
accaatgaagaagaggaggaggcgggaacaggattgagctcccccggcagcaacaacaac
catggcagccaatcgggaacttcggacttggccaatcgggtgcgaggatcctctccaagt
gggtccggctccggtggctcgtctgggggggaccagaggggtcccagctcagatgacggg
gagagggagtcgagtgagggaggaggcgggtccaggggacatcagtccagaagttcccac
tgttcctccagccagaaggactcgggcatgatgctggagaacaccgagagcaacaagagc
tctcagtcccagagcccgtctccccccagcagttctctggcctacagcctgctgtcagcc
agctcagagcaggaccctctttccacctccggctgcagcagcaacgagcagcaccagacg
gcccgcgtccagacccagaaggagatgctgaaagccctgaaggagctcaaggttcgcctg
ccggccgagtgcaagggcaaaggtcgctccagcaccctggacgccctccagtacgccctg
aactgtgtgaagcaggtgcgagccaaccaggagtactaccaccagtggagtgtggaggag
tgtcacggctgcagcctggatctgtctgcacataccactgaggagctggacaacatcgcc
tcagagtacaccctcaaaaatacagacaccttttccatggcggtgtccttcctgacaggc
aaagtggtgtacatctccccccagggctcgtccctgctgcgctgcaagccagagaggctc
caaggggccatcttctccgaactgctggctccccaagacgtcagcaccttctacagcagc
actgccccctgccgcctgcccgcctgggccacctgcatgggctctgtgtccccacggaca
gactgccaccaggggaagtccatgttctgtcgcatcagtgccgaccgggcgcagggaggc
gagatcaaatactaccccttccgcatgaccccctatcagctaaccctgagggacttagac
acgtcagacccccagccctgctgcctgctcatctctgagcgggtacagtccggatacgaa
gctcccaggatccctgctgacaagcggatcttttccaccagtcacactcccagctgtctc
ttccaggaagtagatgaaagggctgtgccgttgttgggctaccttccccaggacctggtg
ggaagccctgtactcctctacctccacccagaggacagaccgatcatggtggccatacat
aggaagatcctccagtctgcaggccagccctttgacagttctcccatgaggatgtgtgcc
cgcagtggggagtacgtgaccatcgacactagctggtcctccttcatcaacccctggagc
agaaaggtggccttcatcgtgggccgccacaaagtccgaaccagccccttgaacgaggac
gtgttcacccctctgcggggctgtgagggccgccccgtggccccagagattgtgcggctg
agcgagcagatccaccgtctcctggtgcagccggtccacagtggagggtcgcagggctac
agcagcctgacctcaaatggttcctgctcccacgagcagcggtaccgacgcacggcctcc
tccgcctccgacagcaagtccaccaacgccatggaggccatggaggcagccgtggtcgcg
ctgcacaaaccgatgacgttccagcagatctgtaaggacgtgtacatggtcaagaccagc
gggcagcaggtctttatcaactctcacaaccgagccctgtcccggcgacacgctgtcaca
gcgctccgagccactggagaagtggagcccatcaggagtctgatcccggaggtggcgtgt
ccatccaaaaccccggtgttcaacacccagcagctgatgaaggaggagccccccagtgcc
tacagctaccaacagattaactgtctggacagcatcattaggttcttggacggctgtaac
gttaagaggaagtttggctcgtcctctaccacgtccacatcggacggagagaaacaacaa
caggaaaccgctgggaatgaaaaaggtggtccagctacctcagtcaccctggttggggac
tcagcgggggtaccccccctggccatgcacagccacaaggcgaagagtgtagcctcagtc
acctctcagtgcagcttcagcagtaccatcgtccacgtgggagacaagaagccccccgag
tcagacgttgtcatggaaaatgctcctcccactcctatgccagccactcccaccacgacc
aggtctccaccgaccgccatcattaaccctccaccgctcaaaacaacctctccacccagc
cggagaggaggtggcctgaccaaggaggtgctctctgctcacacacagcaggaggagcaa
gccttcctctgtcgcttcagtgacctgagccagctgagggtgattgctccatcctcggcc
ctgcgttgcccgctccccaacaccaacccccgccgcagaagagcgtgttcccctgactac
cctgcagctggaggcagcagtggtcgccgtggagccaagaggctgaagcagcaggagtcc
tcagaacagaggtgccctctggctttaggcctgaccggacccctccggagccccaacgtc
gtccccatgaattcccctcccagctccacctacaccctcccaatgatgcccctggggcct
cccaccacatcctcctggcccgtctccgtaggatcccaggccagcctgccctctgtgccc
tacccctcgggtacgctccccctgtaccccatctatcctcctctctcccagcccatacag
aaccagatggtgcctcctatgatggccctggtgctgcccaactacatgttcccacaactt
caccccaacctgccccagatgaccacagccatgaacacaatgggaagccccatgccccag
ccgggagccgccatggttacccccggcccacagcaattcttcaaccccagcgctggtttc
cccttccccggtaccaacgtcatgccatgccccatgcctacgatgccctcgctcatgcaa
actgccatgcctatccagacccaacggccagcctctgggtccagcacccctcagtcatgt
agtcaagtaccagtcgaccaggagggtgcagagtcgcccctcttccactctcgctgctcc
tccccgctcaacctgctgcagcttgtggaggagtcgcctagaaaccggctggagatcgcc
acggcgctggctgcttccgcgcaacaggccacgatcccctcacaagggactcaggggaga
tcgccagatgactccaaggagaacgccaatgattccaaccaggatggtgaatctaccccc
agtgacctactggacctgctcctgcaagaggactcccgctcaggctccgcgtcctctggg
tcgggttctgactccttgggcactgtgtccaacggctgcagctcctcaggcagtggaact
agtcgcagtcggagtagccgcaccagcaagtactttggcagcatcgactcgtcagagaac
gaccactcccgcaaacagccagcaggtggcagcagagcaggaggagacggggaggagcag
ttgattaagtgtgtcctgcaggatcccatctggctcctcatggccaacaccgaccacaag
gtgatgatgacgtaccagctgccgaccaaggacagggagacggtgctgcggcaggaccgc
gaggccctgcgggccatgcacaaacaccagccccgtttcaccgaggaccagaagagagaa
ctgagccaggtccacccctggatacgtaccgggcgtctgccccgcgccatcaacgtctcg
gcatgtatggggtgcaagtcttcccccttaccagagagcaccgtggaccagggaggagac
gctcgcagagaagaggaggagcacgcggcgcactctgaaacacaaggcaacgaccaggaa
atgacaacagaggagcaggaagtgacctggccaacgggggagaagaaagcaagggctggt
gaaacctacatgacccactga

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