Oncorhynchus mykiss (rainbow trout): 100135977
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Entry
100135977 CDS
T07259
Name
(RefSeq) virus-induced CXC chemokine precursor
KO
K12672
C-X-C motif chemokine 11
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04060
Cytokine-cytokine receptor interaction
omy04620
Toll-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
100135977
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
100135977
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
omy04052
]
100135977
Cytokines and neuropeptides [BR:
omy04052
]
Cytokines
Chemokines
100135977
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
IL8
EGF_Mua-3
Motif
Other DBs
NCBI-GeneID:
100135977
NCBI-ProteinID:
NP_001117788
UniProt:
Q8QGB7
LinkDB
All DBs
Position
11:78716975..>78718562
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AA seq
100 aa
AA seq
DB search
MTNTMTSTVLISFLACLLLANVEGQVGHSKARCQCQNGLVNRVKPLHIEKLEVYTSSHSC
RNMEIIVTLKNGEEKKCLNPEAPFAKKTIEKIMKKQRSVQ
NT seq
303 nt
NT seq
+upstream
nt +downstream
nt
atgaccaacacgatgacatcaacggtcctcatcagcttcctggcctgtctgctcctggcc
aatgttgaaggccaggtgggtcattctaaagctcggtgccagtgtcagaatggactggtg
aaccgtgttaaacctcttcacattgagaagctcgaggtgtacacctccagccactcctgc
aggaacatggagatcattgtcactctgaagaacggagaagaaaaaaagtgtctgaatcca
gaggctccatttgccaagaaaaccattgagaaaataatgaaaaaacaaaggagtgtgcag
taa
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