Oncorhynchus mykiss (rainbow trout): 100136004
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Entry
100136004 CDS
T07259
Name
(RefSeq) elongation factor EF1 alpha
KO
K03231
elongation factor 1-alpha
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
100136004
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
omy03019
]
100136004
03016 Transfer RNA biogenesis [BR:
omy03016
]
100136004
03012 Translation factors [BR:
omy03012
]
100136004
04131 Membrane trafficking [BR:
omy04131
]
100136004
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
omy04147
]
100136004
Messenger RNA biogenesis [BR:
omy03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
100136004
Transfer RNA biogenesis [BR:
omy03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
100136004
Translation factors [BR:
omy03012
]
Eukaryotic type
Elongation factors
100136004
Membrane trafficking [BR:
omy04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
100136004
Exosome [BR:
omy04147
]
Exosomal proteins
Proteins found in most exosomes
100136004
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
GTP_EFTU_D4
Gtr1_RagA
EF-G_D2
Motif
Other DBs
NCBI-GeneID:
100136004
NCBI-ProteinID:
NP_001117811
Ensembl:
ENSOMYG00000038328
UniProt:
Q8QFP0
LinkDB
All DBs
Position
32:complement(35590044..35593585)
Genome browser
AA seq
461 aa
AA seq
DB search
MGKEKIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAAEMGKGSFKYAWVL
DKLKAERERGITIDISLWKFETGRYYVTIIDAPGHRDFIKNMITGTSQADCAVLVVAGGV
GEFEAGISKNGQTREHALLAYTLGVKQLIVGVNKMDSTEPPYSQKRFEEIQKEVTTYIKK
IGYNPATVAFVPISGWHGDNMLEASANMGWFKGWKVERKDGNANGVTLLEALDSILPPSR
PTDKPLRLPLQDVYKIGGIGTVPVGRVETGTLKAGMIVTFAPANVTTEVKSVEMHHETLE
SAMPGDNVGFNVKNVSVKDIRRGNVAGDSKNDPPMEAGTFTAQVIILNHPGQISQGYAPV
LDCHTAHIACKFSELKKKIDRRSGKKLEDAPKFLKSGDAAIVDMIPGKPMCVESFQEYPP
LGRFAVRDMRQTVAVGVIKAVDKKAASSGKVTKSAVKAGKK
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaggaaaagatccacattaacattgtggtcattggccatgtcgactccggcaag
tcaaccaccacaggccatctgatctacaagtgcggaggcattgacaagagaaccattgaa
aagttcgagaaggaagcagctgagatgggcaagggctctttcaagtatgcctgggtgctg
gacaagctgaaggctgagagggagcgtggtatcaccattgacatttctctgtggaagttt
gagaccggcaggtactacgtcacaatcattgatgcccctggacacagagatttcatcaag
aacatgatcactggtacctctcaggctgattgcgctgtgctggttgttgctggtggtgtg
ggtgagtttgaggctggtatctccaagaacggccagacccgtgagcacgctctcctcgcc
tacactctgggagtgaaacagctcattgttggagtcaacaagatggactctactgagccc
ccctacagccagaagcggtttgaggagatccagaaggaggtcaccacctacatcaagaag
attggctacaaccctgccactgttgcctttgtgcccatctctggttggcatggggacaac
atgctggaagccagcgccaatatgggctggttcaagggatggaaggtcgaacgtaaggat
ggtaacgccaacggtgtgactctgctggaggccctggactcaatcctgcccccctcccgc
cccacagacaagccccttcgtctgcccctccaggatgtctacaaaatcggcggtattgga
acagtacccgtgggccgtgtggagactggcaccctgaaggccggtatgatcgtcaccttc
gcccccgctaatgtcaccactgaggtgaagtctgtggagatgcaccacgagaccctggaa
tcggccatgcctggtgacaatgttggcttcaacgtcaagaacgtgtccgtcaaggatatc
cgtcgtggcaacgtggctggagacagcaaaaacgaccccccaatggaggccggcaccttc
accgctcaggtcatcatcctgaaccaccctggccagatctcccagggctatgcccctgta
ctggattgccacactgctcacatcgcctgcaagttcagcgagctcaagaagaagatcgac
cgtcgttccggcaagaaacttgaggatgcccccaagttcctgaagtctggagacgctgcc
atcgttgacatgatccccggcaagcccatgtgtgtggagagcttccaggaataccctcct
cttggtcgtttcgctgtgcgtgacatgaggcagactgttgctgttggtgtcatcaaggcc
gtcgacaagaaggctgcctccagcggcaaggtcaccaaatctgccgttaaggctggtaaa
aagtga
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integrated database retrieval system
