KEGG   Oncorhynchus mykiss (rainbow trout): 100136024
Entry
100136024         CDS       T07259                                 
Name
(RefSeq) interleukin-1 beta
  KO
K04519  interleukin 1 beta
Organism
omy  Oncorhynchus mykiss (rainbow trout)
Pathway
omy04010  MAPK signaling pathway
omy04060  Cytokine-cytokine receptor interaction
omy04217  Necroptosis
omy04620  Toll-like receptor signaling pathway
omy04621  NOD-like receptor signaling pathway
omy04623  Cytosolic DNA-sensing pathway
omy04625  C-type lectin receptor signaling pathway
omy05132  Salmonella infection
omy05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:omy00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    100136024
  09133 Signaling molecules and interaction
   04060 Cytokine-cytokine receptor interaction
    100136024
 09140 Cellular Processes
  09143 Cell growth and death
   04217 Necroptosis
    100136024
 09150 Organismal Systems
  09151 Immune system
   04620 Toll-like receptor signaling pathway
    100136024
   04621 NOD-like receptor signaling pathway
    100136024
   04623 Cytosolic DNA-sensing pathway
    100136024
   04625 C-type lectin receptor signaling pathway
    100136024
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    100136024
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    100136024
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04052 Cytokines and neuropeptides [BR:omy04052]
    100136024
   00536 Glycosaminoglycan binding proteins [BR:omy00536]
    100136024
Cytokines and neuropeptides [BR:omy04052]
 Cytokines
  Interleukins
   100136024
Glycosaminoglycan binding proteins [BR:omy00536]
 Heparan sulfate / Heparin
  Cytokines
   100136024
SSDB
Motif
Pfam: IL1 IL1_propep
Other DBs
NCBI-GeneID: 100136024
NCBI-ProteinID: NP_001117819
Ensembl: ENSOMYG00000005094
UniProt: Q9YGD3 A0A060WTK5
LinkDB
Position
6:complement(45904051..45907159)
AA seq 260 aa
MDFESNYSLIKNTSESAAWSSKLPQGLDLEVSHHPITMRHIANLIIAMERLKGGEGVTMG
TEFKDKDLLNFLLESAVEEHIVLELESAPPASRRAAGFSSTSQYECSVTDSENKCWVLMN
EAMELHAMMLQGGSSYHKVHLNLSSYVTPVPIETEARPVALGIKGSNLYLSCSKSGGRPT
LHLEEVADKDQLKSISQQSDMVRFLFYRRNTGVDISTLESASFRNWFISTDMQQDYTKPV
DMCQKAAPNRLTTFTIQRHN
NT seq 783 nt   +upstreamnt  +downstreamnt
atggattttgagtcaaactacagtttaataaagaacacctctgaaagtgcagcatggagc
tccaagctgcctcagggtctggatctggaggtatcccatcaccccatcaccatgcgtcac
attgccaacctcatcatcgccatggagaggttaaagggtggcgagggggttaccatggga
accgagttcaaggacaaggacctgctcaacttcttgctggagagtgctgtggaagaacat
atagtgttggagttggagtcggcacccccagcgagcaggagggcagcagggttcagcagt
acatcacagtatgagtgtagcgtcactgactctgagaacaagtgctgggtcctgatgaat
gaggctatggagctgcacgccatgatgctccagggaggcagcagctaccacaaagtgcat
ttgaacctgtcttcgtacgtcacgcccgtccccattgagactgaagccagacctgtagcc
ctaggcataaagggatccaacctctacctgtcctgctccaaatcgggaggcaggcccacc
ctgcacctagaggaggttgcggacaaggatcagctgaagtccatcagccagcagagcgac
atggtgcgtttccttttctacagacggaacaccggggttgacatcagtaccctggagtct
gccagtttcaggaactggttcatcagcacggacatgcagcaggactacaccaaaccggta
gacatgtgtcagaaggcagcccccaaccgccttaccaccttcaccatccagcgccacaac
taa

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