Oncorhynchus mykiss (rainbow trout): 100136054
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Entry
100136054 CDS
T07259
Name
(RefSeq) THO complex subunit 4
KO
K12881
THO complex subunit 4
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy03013
Nucleocytoplasmic transport
omy03015
mRNA surveillance pathway
omy03040
Spliceosome
omy05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100136054
09122 Translation
03013 Nucleocytoplasmic transport
100136054
03015 mRNA surveillance pathway
100136054
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
100136054
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
omy03019
]
100136054
03041 Spliceosome [BR:
omy03041
]
100136054
Messenger RNA biogenesis [BR:
omy03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
100136054
TREX complex
100136054
Spliceosome [BR:
omy03041
]
Complex C
Other components
EJC/TREX
100136054
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
100136054
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
FoP_duplication
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
100136054
NCBI-ProteinID:
XP_021413942
Ensembl:
ENSOMYG00000028642
UniProt:
A0A8C7S925
LinkDB
All DBs
Position
13:46179912..46183380
Genome browser
AA seq
265 aa
AA seq
DB search
MSDKMDMSLDDIIKQNRQQRGGAGGRGGGRGRGRGGSGVGRGGGVGRGAAAGGFGGRGGG
SGPMRNRPNLSRGRARPTPYSRPKQIPDKWQHDMYGNHGFNASVGGGAGVETGGKLLVSN
LDFGVSDADIQELFAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQYNGVPLD
GRPMNIQLVTSQIDTQRRPPMQGMNRGGGGMNRGRGGGFRGMQRGRGAGRGGGRGRGGRG
GSTKPLSAEELDAQLDAYNARMETS
NT seq
798 nt
NT seq
+upstream
nt +downstream
nt
atgtctgataagatggatatgtctctagacgacatcatcaagcagaacaggcagcagaga
gggggcgcaggaggccgtggtggtggaagaggccgtggccggggaggctctggcgtgggc
cgaggtggtggtgttggccgtggagcagctgctggaggctttgggggccgaggtggagga
tcgggccccatgaggaaccgaccgaacctgagccgtggcagagcaagacctacgccatac
agcaggcccaagcagattcctgataaatggcaacacgacatgtacggcaatcatggcttc
aatgccagtgttgggggtggcgctggtgtggaaaccggagggaagcttcttgtctccaat
ctcgacttcggcgtttcagacgcagatattcaggagctctttgcggagtttggtacactg
aagaaggcagctgttcactatgaccggtcgggcaggagcttaggcactgcagatgtccac
tttgagaggaaggcagatgctctaaaagctatgaaacagtacaacggtgtaccacttgat
gggcgtcccatgaacatacaacttgtcacatcacagatcgacacacaaagacgaccaccc
atgcagggtatgaatcgaggaggtggtggcatgaacaggggtcgtggtggtgggtttaga
gggatgcagagaggacgtggagcaggacgtggaggaggcaggggccgaggtggccgcggg
ggaagcactaagccactttccgctgaagagctggatgcccagttagatgcctacaatgcc
aggatggaaacaagctaa
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integrated database retrieval system