Oncorhynchus mykiss (rainbow trout): 100136088
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Entry
100136088 CDS
T07259
Name
(RefSeq) pro-interleukin-16 isoform X1
KO
K22628
interleukin 16
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
100136088
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
omy04052
]
100136088
Cytokines and neuropeptides [BR:
omy04052
]
Cytokines
Interleukins
100136088
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
100136088
NCBI-ProteinID:
XP_036837102
UniProt:
A0A8K9WN16
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Position
6:complement(83647271..83704964)
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AA seq
1759 aa
AA seq
DB search
MMIDYECPSPLACVPAGRSVCESVLAPHTHTHAAHTHTLTAMPQRYSYQKRKASTAAARR
MERRGRDTGKTNNTNTSHSHRSKKLAMLSRSLILCHSRASDDCPSPEESPPGEAWKGDGG
LGRDGKGNREVERSQKKIQEGPQESGGTMQASTQPPVGATNTLRATGEHKRNMRRSFSIK
ESSIWRMCVTTGAGEEGLGRQTGDSSPQTEDKEPSVERGRKGGGDGHSYLQSTDKPAPFN
GQCLNGHARTEGERQAKNGHAARTEGEGGRQAASRNSHITAYSEESSTCEQQPQSPGGLT
LAPLHSAPLCLADPLAVTNYTETEQTGNNNHLKLAIPEVNEDRGWDTERRGHGLQGQTVC
KRTRSNSTSVHPYWIGDLDTIILKTPELCGSNTHGTVGFFGSRKSQSQQLEFPHNPNQPV
PRPSRSLSSAHLVHSCSNVQAFIICNIVLMKGHGKGLGFSIVGGRDSMYGPMGIYVKTIF
AGGAAAADGRLQEGDEILELNGESLHGLTHEDALQRFKQIKKGLLTLVVRTSLRVGALCG
QAAVAQLCRSRSLSSSTGMSRVSTEMGDYNYLSDVTTANTHTNTVPQPPLAKPRDRVMME
ITLHKEAGVGLGIGLCCVPSGDGCRGVYIHTLSPGSVAHMDSRLRCGDEIMEINNTVVYN
MVLNDVYTVLSQCSPGPVQIIISRHPDPKVSEQQLNDAIAQAVETSQLKQDASEWSIDGL
RRSDPCSHSRGKCERCVARSFSQLTARRAQKNMTRSCSDSNTYNQNHHHNHQHNRCPGPG
TNLINGQSLTIPNHNMHHNLMERVHSLDIPMGSTPEPWCDNRLSALVYPIPDDDYNVPYN
SPAANLSCQRTLDLATRGNKNRPKALAPPRRYCRHQDVTSEEGAPGGLPDSNVSSRGSPV
REDGWSPTHTNCQEVESEREREREREREHSRGSGETLTHSEARSAAITDCPRYSSCTEDR
LHTGAESAFHLCSQSKRPGLRRQGRVEQLPPEKLHDPWVRISDSAPDLGGPEDPHQNQSL
THPSTHRHNTHSHSSTHQQQAHHLSSHHDATHTPSQTDRHPNDTHSPVAMSQPSEFPELP
EFNCTSTHHTAPDPTTPSTPASLISTPSPRTEDPPGVRKGPPVAPKPVWNRQSLRSIRNG
RPQAELAKPLDIRGGGTTFGVRLRPTSSTAQLSIKQKIHSFETFSSPEGKGQEMEGNNRR
PLAPSTSLPLKDKALVRSDPPLLEENGTIQHDMGKGAKVTSPIPDEDKDRRMSSFPPGAS
PHSILPPSPASHPSPPTCFSLLPTPHPTSELQTPVEETTDPNAEISDSPSPDDTTTSPST
LEAPLPEAEAETEPLDGAVEASISPSGPVPRRSSSSKGESFGPLQPPEEEEGDQNHAQAQ
GKQASLRTRSLPLPTSPSPDGSTTLQGLEGESLGKILSFSNQVSHALMRSMHSLLPSLYP
TRPGNPGSDPPPVSPLVCSPEEPDPVQNTPLSPGPNSNENSFSVSLSDLRQCTIERGEEG
GDLVSRPSPSACAHSVISAIPPQEIQTMIQEVKALDEETLKQFEHIQVVILHKEEGAGLG
FSIAGGIDLESKATTVHRVFPHGLAAQEGTVEKGDEVLSINGQTLRGATHADATATLRQA
RTMRLAVVVVSKGREGGGGNKTDDSSVSSSSTDLNPTVEDGGDMLTVELETGGGGVGFSL
DGGKGSIHGDRPLVINRIFKGGAAEQSGLQSGDELLQVQSTSLQELSRFEAWNIVKALPE
GNITLVIRRRKEDEAEGSA
NT seq
5280 nt
NT seq
+upstream
nt +downstream
nt
atgatgattgactatgagtgtccctctccattagcctgtgtgccggctgggaggagtgtg
tgtgagagtgtgttagcaccacacacacacacacacgcagcacacacacacactctaacg
gccatgccccagagatactcctaccagaagaggaaagccagcacggcagcagctcggagg
atggagaggcgaggcagggacactgggaagaccaacaacaccaacactagccacagccac
cgctccaagaagctagccatgctctccaggtccctgatcctctgtcactccagagccagt
gatgactgccccagccccgaagagagcccgccaggggaggcctggaagggagacgggggc
ttggggagagatgggaaggggaacagggaggtggagaggtcccagaagaagatccaggaa
ggaccccaggagagtggaggaactatgcaggcatctacacagccacccgtaggggccacc
aacacactcagggctacaggagaacacaagaggaatatgaggaggtccttcagtatcaag
gagagcagtatctggaggatgtgtgtaacgacgggggcgggtgaggagggtctgggccga
cagactggcgatagcagcccccagacggaggacaaagaacccagtgtggagcgagggagg
aagggaggaggggatggacacagttaccttcagagtacagacaagcctgcaccttttaac
ggacagtgtctgaacggccatgccaggacagagggggagaggcaggccaagaacggccat
gctgcaaggacagagggggagggagggaggcaggccgcctccaggaacagccacataaca
gcctacagtgaggaaagctcaacatgtgagcagcagccccagtcccctggaggtctaacc
ctggcccccctgcactcggcccccctgtgcctggcagaccccctggcagtgaccaactac
acagagacagaacaaactgggaacaacaaccacctcaagttggcaatcccagaggtgaat
gaggacagaggttgggacacagagaggagaggacatggtcttcagggacagacagtctgc
aagaggacccgctccaactctaccagtgtccatccatactggattggagacctggacacc
attatcctgaagacgcctgagctttgcgggagcaacacccacggaaccgtcggtttcttt
ggcagcaggaagtcccagtcccagcagctggagtttcctcacaaccccaaccagcccgtt
ccccgtccctctcgctctcttagctccgcccatctggtccactcctgcagtaacgtccaa
gccttcatcatctgtaacattgtgctgatgaagggccatggcaagggtctggggttcagc
attgtggggggcagggacagcatgtacggacccatgggtatctacgtcaagaccatcttc
gctggaggggccgcggctgccgatggcagactacaggagggggatgagatcctggagttg
aatggagagtctctacatggactaactcatgaggatgcactacagagattcaaacagata
aagaagggtctgttgactctggtggtgaggaccagcctgcgtgtcggcgccctctgtggc
caggcagcggtagcacagctgtgtcggtctcgctctctcagctccagtactggcatgtcc
agggtcagcactgaaatgggggactacaattacctcagtgatgtcaccacagccaacaca
cacaccaacaccgtacctcagccacctttggccaaaccccgagatcgtgtcatgatggag
atcaccttgcataaagaggccggtgtggggctgggcattgggctgtgttgcgtgccgtct
ggagatggttgccgtggcgtctatatccacaccctgtcccctgggtcggtggcacacatg
gacagtagactcagatgtggagatgagattatggagatcaacaacacagtggtgtacaac
atggtactgaatgatgtgtacacggttctgagtcagtgctcccccgggccagtccagatc
atcatcagtcgacaccctgaccccaaagtgtcagagcagcagctgaacgatgccatagcc
caggctgtagagaccagccaactaaagcaggacgccagtgagtggagtatagacggcctg
cgtaggtctgacccctgttcccactccagagggaagtgtgagcgctgtgtggcgaggagc
ttcagccaactgactgcccggcgagcccagaagaacatgacccgctcctgtagtgacagc
aacacatacaaccagaaccaccatcataaccatcagcacaaccgctgccccggaccagga
accaacctgattaatggtcaatccctgactatacccaaccacaacatgcaccataatctg
atggaaagggtccacagcctcgacatccccatggggtccacgcctgagccctggtgtgat
aacagactgtctgcattggtctaccctatccctgatgacgactataacgtcccctacaac
tccccagcagccaacctctcctgccagcgcacgttagacctggccacaaggggaaataag
aacaggcccaaagccctggcacctccaaggaggtactgccgacaccaggacgtcactagt
gaggagggggcccctgggggcctgccagactccaatgtttccagtagaggctcccctgtt
agagaggacggatggagtcccacacataccaactgtcaggaagtagagagtgagagagaa
agagagagagaaagagagcgagaacactcacggggaagtggagagactctcacccactca
gaggctcgctctgctgccatcaccgactgccctcgatactcatcctgcacagaagacaga
ctacacacaggtgctgaatctgccttccacctctgctcccagagtaagaggccgggcctg
aggaggcagggccgcgtggagcagctccccccagaaaagcttcacgacccctgggttagg
atctccgacagcgcccctgatcttggaggtcctgaagacccccatcagaaccagagtctg
actcatccgagcacacaccgtcacaacacacactcccacagtagcacacaccaacaacaa
gcacaccatctcagctcacaccacgacgccacacacactccatcccaaaccgacagacac
cccaacgacacacactccccagtcgccatgagccaaccgagtgagtttcccgagcttcct
gaattcaactgtacttccacccaccacaccgccccagaccccaccaccccctccacccct
gcctccctaatctccacccccagcccaaggactgaggaccccccaggggtgaggaagggc
cccccagttgcccccaagcctgtgtggaaccgtcagagccttaggagtattaggaatggg
aggccccaggctgagctggccaaacccctggacatcagaggcggtggaaccaccttcggg
gtacgtctgcggcccacctcctctacagcccagctgtcaatcaagcagaagatccattca
tttgagaccttctctagtcctgagggtaaaggtcaggagatggagggcaacaacaggagg
cccctagccccctccacttccctccctctgaaggacaaggcactcgtcaggagtgacccc
cctctcttagaggagaatggcacaatccaacatgacatgggcaaaggagccaaagtgacc
tctccaatccctgacgaggacaaggacaggaggatgtcctcttttccccctggagcctct
cctcactccatccttccgccctctcctgcctcccacccttctcctcctacctgtttttct
cttcttccgaccccccaccctacctcggagctccagaccccagtggaagagacaacagac
cccaatgcagagatctctgactcgccatcccccgatgacaccaccacctccccatccacc
ctagaggcacctctccccgaggccgaagcagaaacagagcccctggatggggctgtagag
gcctccatctccccctcgggcccggtgcccaggaggtccagcagctccaagggagagagc
tttggtccactacaaccaccagaggaggaggagggagaccagaaccatgcccaggctcag
ggcaagcaggccagcctgcggacgcgtagcctgcccctgcctacctctccctccccggat
gggtcaacaactctacaaggactggagggagagagcctggggaagatactttccttcagt
aaccaggtttcccatgccctgatgcgttccatgcactccctgctcccctccctctatcct
actaggccgggtaaccccgggtcagacccaccccctgtatcccctctagtctgcagcccg
gaggagcctgacccggtccagaacactcccctctcccctggccccaacagcaatgagaat
agcttctctgtcagcctatctgatctgaggcagtgtaccattgagcggggggaggaggga
ggggacctggtctcacgcccatctccgtcagcatgtgcccactctgttatctcagccatc
cctccacaggaaatacagaccatgatccaggaagtgaaagctctggatgaggaaacactg
aagcaatttgagcacatccaagtggtgattctgcacaaggaggaaggagcaggtctgggt
ttcagcattgcaggtgggatagacctggagagcaaggctaccacagtgcatcgtgttttc
ccccacggcctggcggctcaagaggggaccgtggagaagggtgacgaggtgctgtccatc
aacggccagacactaaggggtgcgacacacgcggacgccaccgccacgctgcgccaggcc
cgcaccatgagactggccgtggtggtggtaagcaaggggagagagggaggaggagggaac
aagactgatgattcctctgtcagcagtagcagtacagacctcaaccccacagtggaggat
gggggagacatgctgactgtggagctggagacaggaggagggggcgtgggcttcagtttg
gatggagggaaaggctctatccatggagacaggcctctggtcatcaacaggatatttaaa
ggtggtgctgcggagcagagcgggttgcagtctggtgatgagctgctgcaggtccagagc
acctccctacaggagctgagccgcttcgaggcctggaacatcgtcaaggctctgcctgag
ggtaacatcactctagtcatccggaggaggaaggaggatgaggcagaggggtctgcctga
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integrated database retrieval system