Oncorhynchus mykiss (rainbow trout): 100136089
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Entry
100136089 CDS
T07259
Symbol
csf1
Name
(RefSeq) macrophage colony-stimulating factor precursor
KO
K05453
macrophage colony-stimulating factor 1
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04010
MAPK signaling pathway
omy04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
100136089 (csf1)
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
100136089 (csf1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
omy04052
]
100136089 (csf1)
Cytokines and neuropeptides [BR:
omy04052
]
Cytokines
CSF and other factors
100136089 (csf1)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CSF-1
Motif
Other DBs
NCBI-GeneID:
100136089
NCBI-ProteinID:
NP_001117866
Ensembl:
ENSOMYG00000034080
UniProt:
Q575Z4
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All DBs
Position
17:51601433..51640412
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AA seq
593 aa
AA seq
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MNTHKPAHKAKARHLCFLFLMCFPLAWGGVPGPCRHSVTKGHLLNLNCLIDNQLENGWSI
TYVFTERQSLSEVCYIKAAFPQILELLNTHFKYVRKSDNGRYVKLLKKVIYDLYSQNCIP
EINEEIEDTPLKFVRMHSTSPREALTKARGVIEMCMTLMTKSNGPVDWNCEEEYAEDYQE
STTALPTPTSAEPEPERQCTCPTVGPVTPDVSLVSHSVWSSPPQPTLSQLTSIVPPRLTH
PSLGTKGTEPRVFLVSSGTVRPPFPRELQRTVPDGRSLGGGREGDIHWDFRPPSPNGTES
DSGLYQAVADTPSATNEPSPSSPPSLVLLGTVGSHDETFYYPQTERIRETSTARPAGRGA
AGSPHSHFAVAGAKLVTPVPFLYKLIGITPSSDESTAYVLAKRSLDARNYGILQDWVSTE
TPHLDDTREKYPGTERYLHDWNPPIESTTTEASPRLKMTVEEPDKLHTTTEAHDQVTKTE
PNHPRTSNKEVFSTDILSERTAADDAPISERSSEGSVKEFRHGKTGHSDLSISYQTAFII
AAVCSGPILIITLFCLSEKKRLQALIHSTSIIENQRACSSIEDIELQYCKAKD
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atgaacacacacaaaccagcccacaaagccaaggctaggcatctgtgcttcctcttcctc
atgtgcttccctttggcgtggggtggcgtccctggtccatgtcggcactctgtgaccaag
ggtcacctcctcaacctcaactgcctgattgataatcagttggagaatggctggtcaata
acctacgtattcactgagcgccagagtttgagtgaagtctgttacatcaaagcagcattt
ccacaaatcctggagcttctgaacacacacttcaagtatgtcaggaaatcggacaacggg
cgctatgtcaaactcctgaaaaaggtcatatatgacctctactcccaaaactgcatacct
gaaattaatgaggagattgaggacaccccattgaagtttgtcagaatgcacagcacctcg
cccagagaggctctgacgaaagcccggggggtcattgagatgtgcatgaccctgatgacc
aagagcaacgggcccgtcgactggaactgtgaggaagagtatgcagaggattaccaagaa
tccaccactgccctccccacccccacatcagctgaacctgaacctgaacgccagtgtacg
tgtccgacagtgggtccggtaacccctgatgtctccctggtgtcccacagcgtatggagc
agtcccccacagcccaccctctcccaactcacctcgattgtgcctcccaggctgactcat
ccatccctgggtaccaagggcactgagccccgggtgttcctggtgagttctggtaccgta
agaccccccttccccagggagctgcagcggactgtccccgatggacgttcacttggaggg
ggcagagagggggatatacactgggactttcgtccaccttcacccaatggaactgagtca
gattcgggactctaccaggcagttgctgacaccccgtctgccacgaatgaaccttccccg
tcttcccctcctagtctggttcttctggggaccgttggctcccatgacgagacattttac
tacccccagactgagaggataagggagacttccacagcccgaccagcagggagaggagca
gcaggctcaccccacagtcacttcgctgttgctggggccaagctggtcacaccagtccct
ttcctttacaagttgattggcatcacccccagtagtgatgagagcactgcctatgtgttg
gccaagaggtcgctggatgccaggaattatggaatacttcaggattgggtttcaacagag
acccctcatctagacgacactagagaaaaatacccaggcacagagagatatttacatgac
tggaaccctccgattgaaagcactacgaccgaagcatctccacgtttgaagatgacagtg
gaggagccagacaaactacacaccactacagaggcacacgaccaagtcacgaagactgag
ccaaaccatcctaggacatccaataaggaagtattcagcacagatatcctgtcagagagg
acagctgcagacgatgctcctatttcagaaaggtccagtgaaggctcagtgaaggaattc
cgacacgggaaaactggtcattccgatttaagcatctcctaccagacagcctttatcatt
gcagcagtgtgcagcggaccaatcctgatcattaccctattctgtctcagtgagaagaag
agactccaagcccttatccacagtaccagcataattgaaaaccagagggcatgcagcagc
attgaggacattgagctacaatattgtaaagccaaggattga
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