Oncorhynchus mykiss (rainbow trout): 100136137
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Entry
100136137 CDS
T07259
Name
(RefSeq) poly(A) polymerase type 3
KO
K14376
poly(A) polymerase [EC:
2.7.7.19
]
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
100136137
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
omy03019
]
100136137
Enzymes [BR:
omy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
100136137
Messenger RNA biogenesis [BR:
omy03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Poly(A) addition factors
100136137
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAP_NTPase
PAP_central
PAP_RNA-bind
NTP_transf_2
MTPAP-like_central
DUF6431
Motif
Other DBs
NCBI-GeneID:
100136137
NCBI-ProteinID:
XP_036840565
LinkDB
All DBs
Position
8:8402224..8423584
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AA seq
715 aa
AA seq
DB search
MPFPSTTQVLLGRETPKHYGITSPISLAQAKEADLVLTHRLTEALKPYGVFEEELELQRR
IHVLGKLNTLVKEWIRDVSETKNLPASVIETVGGKIFTFGSYRLGVHTKGADIDALCVAP
RHVERTDFFSSFLDKLKEQEEVKDLRAVEEAFVPVIKLSFDSIEIDILFARLALQTIPEN
LDLRDDGLLKNLDIRCIRSLNGCRVTDEILHLVPNIENFRLTLRTIKLWAKRHNIYSNIL
GFLGGVSWAMLVARTCQLYPNAVASTLVHKFFLVFSKWEWPNPVLLKQPEDCNLNLPVWD
PRVTPSDRYHLMPIITPAYPQQNSTYNVSASTRAVMVDEFKQGLAITDDILQSKAEWSKL
FEAPNFFEKYKHYIVLLASAPTEKQHLEWVGLVESKIRILVGNLEKNEFITLAHVNPQSF
PGPKESREKEEVSTMWVIGVIFKKMEASENLNVDLTIDIQSFTDTVYRQAMNSKMFEADM
KIQAMHVKRRQLHQLLPNLVMPKRRKHSTEGLRQMNDSSLDLSLDSDNSMSVPSPTAMPA
TVPTSTPVKCGPLGPPPSPLAAAAGQPEAPAVKRPGSPMQEERKRFKSDAEDSAVEKKPS
GDTVPTSLTPSPPPTMGPPAAPRTSRQEMLEEEDPSPVPETRTTVNGAAAGEECTTVEAQ
VNEDSMSEEMPASEGEGKMEADIKRMVSADLSDVPLLPANPIPVVKNSIKLRLSR
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgccctttccgtctacaacccaggtgttgttgggtcgggaaacacccaagcactatggg
atcacttctcctatcagcctggcccaagccaaggaggctgacctggtcctcacacacagg
ctgactgaggccctgaaaccatacggggtgtttgaagaggagctggaactacagcgcaga
atacacgtgttgggaaaactgaacacactggtgaaggaatggatccgtgacgtcagtgag
acaaagaatctgcctgcctcagtgattgaaacggttggagggaagatcttcacatttggg
tcctacaggttaggagtccacactaaaggtgctgacattgatgccctgtgtgtggctcct
cggcatgtggagagaacagacttcttctcctcgttcctggacaagctgaaggagcaggag
gaggtcaaagatttgagggctgttgaggaggcatttgtccccgtgataaagctgtctttc
gacagcattgagatcgatatcctgtttgctcggttagcgttgcaaaccatcccagagaac
ctggacctccgagatgacgggctgctgaagaaccttgacatccgctgcattaggagtctc
aatggttgtagagttacagatgaaatcctccatcttgtgcccaacattgagaacttcaga
ctgacactgaggaccatcaagctgtgggctaaacgtcataacatctacagtaatatcctg
ggcttcctgggtggtgtctcctgggccatgctggtagccaggacctgccagctctacccc
aacgccgtggcctccacccttgtacacaagttcttcctcgtcttctccaaatgggaatgg
cccaaccctgttctcctgaagcagccagaggactgcaacctgaacctgccagtctgggac
cccagggtgacccccagtgaccggtaccacctgatgcccatcatcacaccagcctacccc
cagcagaactctacctacaacgtctctgcctctacgcgtgccgtcatggtggacgagttc
aaacagggtctggccatcacagatgacattttgcagagtaaagcagagtggtccaaacta
tttgaagcaccaaacttctttgagaaatacaagcattatattgtgttgctagcaagcgcc
cccaccgagaagcagcacctggagtgggttggtctggttgagtctaagatcaggatctta
gtaggaaacctggagaagaatgagttcataacgttggcccatgtcaacccccagtcattc
cctggacccaaggaaagcagggagaaagaggaggtcagcaccatgtgggtgataggggtt
atctttaagaagatggaggcatcagagaacctcaacgttgacctgaccattgacatccag
tcctttactgacacggtgtaccggcaggcgatgaacagcaagatgtttgaggcggacatg
aagatccaggccatgcatgtgaagaggagacaacttcaccagctactgcccaacctggtc
atgcccaaacgcaggaagcactcgacagagggacttcgtcagatgaatgacagtagtctg
gacctatcgttagacagtgacaacagtatgtctgtgccatcccccacggccatgccagcc
actgtgcccacgtcaaccccagtgaagtgtggcccactaggtccccctccaagtcccctt
gcggctgcagccggccagcctgaggccccagctgtgaagagacctggctcccctatgcag
gaagagaggaagcggttcaaatcagatgctgaggattcagctgttgagaaaaagccttca
ggagacacagtccccacaagcctgaccccctctcctccgcccaccatgggccccccagcg
gccccccgcacctctcgccaggagatgctggaggaggaggacccctccccagtcccagag
actaggacaacagtgaatggggcagctgccggagaggagtgcaccactgtggaggcacag
gtcaatgaggacagtatgtccgaggagatgcctgcttctgaaggggaaggcaagatggag
gcagatattaagcgaatggtcagtgcggatctgtctgatgtgcccctcctgccagccaac
ccaattccagtggtgaagaactctataaagcttcgcctcagcaggtag
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