Oncorhynchus mykiss (rainbow trout): 100136181
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Entry
100136181 CDS
T07259
Name
(RefSeq) syntaxin 1B
KO
K08486
syntaxin 1B/2/3
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
100136181
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
omy04131
]
100136181
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
omy04147
]
100136181
Membrane trafficking [BR:
omy04131
]
SNARE
Syntaxin (Qa)
Stx-PM
100136181
Exosome [BR:
omy04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
100136181
Exosomal proteins of other body fluids (saliva and urine)
100136181
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syntaxin
SNARE
Syntaxin_2
AAA_13
GNVR
Lzipper-MIP1
Lge1
Spectrin_Anc-1
Motif
Other DBs
NCBI-GeneID:
100136181
NCBI-ProteinID:
NP_001117929
Ensembl:
ENSOMYG00000009038
UniProt:
Q7SYF0
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Position
13:34782778..34844267
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AA seq
288 aa
AA seq
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MKDRTQELRSAKDSDDDEEVVQVDRDHFMDEFFEQVEEIRVCIDKLFSRVEQVKKQHSAI
LAAPNPDEKTKQELEDLTADIKKTANKVRSKLKAIEQSIEQEEGLNRSSADLRIRKTQHS
TLSRKFVEVMTEYNTTQSKYRDRCKDRIQRQLEITGRTTTNEELEDMLESGKLAIFTDDI
KMDSQIDKQALNEIETRHTEIIKLENSIRELHDMFVDMAMLVESQGEMIDRIEYNVEHSV
DFVERAVSDTKKAVKYQSQARKKKLMIIVCCTILGVVLASTIGGYLGF
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atgaaggatcgtacacaagaactacgaagtgctaaggacagcgatgatgatgaagaagtt
gtccaggttgatcgggatcacttcatggatgagttcttcgaacaggtggaagagatccga
gtctgtatagataagctgttcagtagggtggagcaggtcaagaagcagcatagcgccatc
ctggcagcgcccaaccctgacgaaaagaccaagcaggagttggaggacctcacagctgac
atcaagaagacagccaataaagttcgctcaaaattaaaagcaatcgagcagagcattgag
caggaggaagggctgaacagatcatctgcagacctgcgaattcgtaagacacagcactcg
acgctgtcacgcaagtttgtagaggtgatgaccgagtacaacaccacgcagtccaaatac
agggaccgctgcaaggaccgtatccagagacagctggagatcactgggagaacaaccacc
aacgaggagctggaggatatgctggagagtggcaagcttgccattttcaccgatgacatc
aagatggactctcagatagacaagcaagccctgaatgagattgagacccgacacaccgag
atcatcaagctggagaacagcatccgtgagctgcacgacatgtttgtggacatggccatg
ctggtcgagagccagggagagatgattgacagaattgagtacaacgtggagcactccgtg
gactttgtggagcgggcggtgtctgacaccaagaaggctgtcaaataccagagccaggct
cgcaagaagaagctcatgatcattgtctgctgtactattctgggagtcgtcttggcgtcc
actatcggcggatacctgggcttttaa
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