KEGG   Oncorhynchus mykiss (rainbow trout): 100136186
Entry
100136186         CDS       T07259                                 
Symbol
aptx
Name
(RefSeq) aprataxin
  KO
K10863  aprataxin [EC:3.6.1.70 3.6.1.71 3.6.1.72]
Organism
omy  Oncorhynchus mykiss (rainbow trout)
Pathway
omy03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:omy00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    100136186 (aptx)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:omy03400]
    100136186 (aptx)
Enzymes [BR:omy01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.1  In phosphorus-containing anhydrides
    3.6.1.70  guanosine-5'-diphospho-5'-[DNA] diphosphatase
     100136186 (aptx)
    3.6.1.71  adenosine-5'-diphospho-5'-[DNA] diphosphatase
     100136186 (aptx)
    3.6.1.72  DNA-3'-diphospho-5'-guanosine diphosphatase
     100136186 (aptx)
DNA repair and recombination proteins [BR:omy03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     100136186 (aptx)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Other NHEJ factors
     100136186 (aptx)
SSDB
Motif
Pfam: DcpS_C FHA_2 zf-C2HE HIT FHA zf-C2H2_4 zf-C2H2 zf-C2H2_6 Methyltransf_4
Other DBs
NCBI-GeneID: 100136186
NCBI-ProteinID: NP_001117934
Ensembl: ENSOMYG00000009236
UniProt: Q6EF50
LinkDB
Position
6:10384908..10386345
AA seq 348 aa
MSICLLISKNGRHKPINLPHLQTVVLGRSPETTIKDKKCSREQVELKADCNKGYISVKQL
GVNPTSVDSEVVGKGNQVEMRSGQQLHMVNELYPYTVCFKEDPSNSQSSVGTKRPCGPAS
EEREFHREPPGHKVPRKTEDSTQCKHGGSTSTNTRPEPQTTEKTETLGYWSQGLKASMQD
PKMQVYKDDRVVVIMDKYPKAHYHWLVLPWESIPSLKTLHRGHCDLLRHMNQVADRIVQQ
QCPDAGLLHFRQGYHAIPSMSHVHLHVISQDFDSPWLKNKKHWNSFTTDYFIESQEVIQM
LEKDGKVTVKQGTNELLKLPLCCHVCGMALSTIPQLKEHLKSHPYGRL
NT seq 1047 nt   +upstreamnt  +downstreamnt
atgtctatttgtttgctgatcagcaaaaatggaaggcataaaccgattaatctacctcac
ctacagacagttgtcttgggtcggagtccagaaacaacgataaaagacaaaaaatgttcc
agggagcaagttgagctcaaggctgactgcaacaaagggtatatcagtgtaaaacaactg
ggtgtcaaccccactagtgtggactctgaggtggtgggtaaaggcaaccaagtggagatg
agatctggccagcagctgcacatggtcaatgagctgtacccttatactgtgtgcttcaaa
gaggatccatccaactctcagtccagtgtgggcaccaagaggccctgtgggcctgcctca
gaggagcgggagtttcacagagagccccccgggcataaagtaccaaggaaaacagaggac
tccactcagtgcaagcatggagggtccacctccactaacacacggcctgaacctcaaaca
acagagaaaacagaaactttaggatattggagccaaggattgaaagcctcaatgcaagac
cccaaaatgcaggtctacaaggatgacagagtagttgttatcatggacaagtaccccaag
gctcactaccactggctggtcctgccctgggagtccatccccagtctgaagacactgcac
agggggcactgtgatctgttgaggcacatgaatcaggtagcagacaggattgtacaacag
cagtgccccgatgctggcctgttacacttccgccagggctaccacgccatccccagtatg
agccatgtccatctacacgtgatcagccaggactttgactccccttggttaaagaacaag
aaacactggaattcattcacaaccgactatttcatagaatctcaagaagtcatccagatg
ctggaaaaggatgggaaggtcacggtaaaacaagggacaaatgagttgttgaaactacct
ctctgctgtcacgtgtgtggcatggcgctgtccaccataccacaacttaaggagcatctg
aaatctcacccctatggtagattgtga

DBGET integrated database retrieval system