Oncorhynchus mykiss (rainbow trout): 100136224
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Entry
100136224 CDS
T07259
Symbol
capn2
Name
(RefSeq) calpain 2 catalytic subunit
KO
K03853
calpain-2 [EC:
3.4.22.53
]
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04141
Protein processing in endoplasmic reticulum
omy04210
Apoptosis
omy04217
Necroptosis
omy04218
Cellular senescence
omy04510
Focal adhesion
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
100136224 (capn2)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
100136224 (capn2)
04217 Necroptosis
100136224 (capn2)
04218 Cellular senescence
100136224 (capn2)
09144 Cellular community - eukaryotes
04510 Focal adhesion
100136224 (capn2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
omy01002
]
100136224 (capn2)
Enzymes [BR:
omy01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.53 calpain-2
100136224 (capn2)
Peptidases and inhibitors [BR:
omy01002
]
Cysteine peptidases
Family C2: calpain family
100136224 (capn2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
EF-hand_1
EF-hand_7
CAPN13-like_C_EFh
EF-hand_8
DUF5074
Linocin_M18
Motif
Other DBs
NCBI-GeneID:
100136224
NCBI-ProteinID:
NP_001117963
UniProt:
Q672G9
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All DBs
Position
20:44091400..44134903
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AA seq
701 aa
AA seq
DB search
MAGVASTLAKKRALAAGFGTNANASKYLNQDFESLRSECLGRGSLFTDSTFPAEPASLGF
NELGPRSSKTRGVQWKRPGELVSSPEFIVGGASRTDICQGGLGDCWLLAAIASLTLNEDV
MARVVPEGQGFGRGEYAGIFHFQFWQFGEWVDVVIDDRLPTKDGKLLFVHSAEGSEFWSA
LLEKAYAKVNGCYEALSGGSTTEGFEDFTGGIAENYDLKKAPSDLFQIIRKALASGALLG
CSIDITSQADSEAVTYQKLVKGHAYSLTGAMEVNYRGRKEKLVRVRNPWGTVEWTGAWSD
NSSEWNSVDFSERDVVKADDGEFWMSYTDFMKNYHRLEICTLTPDTLLLTTDDVKHWSVS
NYDGAWRKGSTAGGCRNNPYTFWMNPQFKIKLEEEDDDPGDDEVGCSFVVGLIQKNRRRM
RKAGEDMHTIGFAIYEVPEQFHGQREVHLDKNYFLSHAQTARSETFINLREVSTRFKLPP
GEYLIVPSTFEANLNGDFCLRVFSEKQAETLPCDDPVKAELEDDTVPEGEVDAGFRGLFT
KLAGDDMEISASELRSIFNKIVAKRTDIKTDGFSLDTARIMVNLMDDSGNGKLGLVEFAT
LWKKIQKYLSIYKSNDMDGSGCMSTPEMRMALNKAGFSLNNTLHQVLAARYGEADMTIDF
DNFVACVMRLEMMFKVFKKLDMDDTGFIELDFFQWLSFSMI
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atggctggggtggcatcaacgttggccaagaagagggctttggccgcaggatttggcact
aatgccaatgcgtcgaagtacctaaaccaagacttcgagtctctcaggagcgagtgtctg
ggtagaggttcacttttcacggattccacttttccagccgaacctgcgtccttgggattc
aatgagctcggaccgagatcttccaaaaccagaggtgtgcaatggaaacgacctggggag
ctggtgtccagcccggagttcatcgttggtggagcctcgagaaccgacatctgtcaaggc
ggcttgggtgactgctggctcctggcggccatcgcctctctgaccctgaatgaagatgtg
atggcccgggtcgttcctgaaggacaaggatttggacgtggagagtacgctgggatcttt
cacttccagttctggcagtttggtgagtgggtggacgtggtgattgacgaccggctgcca
acgaaggatggaaagctgctgtttgttcactcagccgagggctctgagttctggagcgcc
ctgctggagaaggcctacgccaaggtgaatggatgctatgaggctctgtcagggggctcc
accactgagggctttgaggacttcacaggagggatagcagagaactatgacctgaagaag
gctccctccgacctgttccagatcatcaggaaagccctggcctctggagctctgctgggc
tgttccatcgacatcaccagccaggcagactcggaggccgtcacctatcagaagctggtg
aaaggacacgcctactctctgaccggggcaatggaggtgaactaccgtgggcgtaaggag
aagctggtcagagtgcgtaacccctggggaacggtggagtggactggggcctggagtgac
aactcctcggagtggaacagcgtagatttttctgagcgtgacgttgtgaaagcagacgat
ggagagttctggatgtcgtacacggacttcatgaagaattaccatcgtctggagatctgc
actctgacccctgacaccctcctactgaccactgatgacgttaaacactggagcgtgtct
aactacgatggggcctggaggaaaggatcgaccgcaggaggatgcaggaacaacccctac
acgttctggatgaatccccagttcaagatcaagctggaggaagaggatgacgacccgggt
gatgatgaggtgggctgtagcttcgtggtgggactcatccaaaagaacagaagacggatg
aggaaagcaggagaggacatgcacaccatcggattcgccatctatgaggtgccggaacag
ttccacggccagcgggaggtccacctggacaagaactacttcctgtctcacgcccagacg
gcccgttcggagaccttcatcaacctgagagaggtcagcacccgcttcaaactgccccca
ggagaatacctcatcgtcccctccaccttcgaggccaacctgaacggggacttctgccta
cgagtgttctccgagaaacaggccgaaacactgccctgtgacgacccggttaaggcagaa
ctagaggatgacacagtacccgagggggaggttgatgctggcttcaggggcctgttcact
aagctagctggagatgatatggagatttcagcatctgagctcaggagtattttcaacaaa
atcgttgctaagcgaacggacataaagacggacggcttcagcctggacacagccagaatc
atggtcaacctcatggacgacagtggtaatggcaaactggggctggtagaatttgcaaca
ctgtggaagaagattcagaaatacctgtccatctataagagcaatgacatggatgggtct
ggctgtatgagcacaccagagatgaggatggccttgaacaaagcaggtttcagcctgaac
aacactctccaccaggttttggcagctcggtatggagaggccgacatgaccattgacttt
gataacttcgtggcttgcgtcatgcgcctggagatgatgttcaaagtcttcaagaagctt
gacatggatgacactggtttcattgaattggatttcttccagtggttgtcattttccatg
atctag
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