Oncorhynchus mykiss (rainbow trout): 100136236
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Entry
100136236 CDS
T07259
Symbol
crtam
Name
(RefSeq) cytotoxic and regulatory T-cell molecule precursor
KO
K16361
cytotoxic and regulatory T-cell molecule
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
100136236 (crtam)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
omy04515
]
100136236 (crtam)
04090 CD molecules [BR:
omy04090
]
100136236 (crtam)
Cell adhesion molecules [BR:
omy04515
]
Immunoglobulin superfamily
Nectin family
100136236 (crtam)
CD molecules [BR:
omy04090
]
Proteins
100136236 (crtam)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
ig
I-set
V-set
Ig_2
C2-set_2
C2-set_3
Lep_receptor_Ig
C1-set
LapA_dom
DUF6476
V-set_CD47
DUF4690
Ig_PDGFR_d4
Motif
Other DBs
NCBI-GeneID:
100136236
NCBI-ProteinID:
NP_001117972
Ensembl:
ENSOMYG00000015507
UniProt:
Q64HX5
LinkDB
All DBs
Position
10:21611342..21644124
Genome browser
AA seq
426 aa
AA seq
DB search
MPLKLQLCFLVLFVGGSVAVQHMTVMEGETLTIKCHIRNAHRSHVEWKNPNGHVMFFNDH
KALRDKRYKIINLSESDFSVSVSDVTFKDGGLYTCLHYTKVPVVKSVTVTVLGMPKLEIT
EHNGKTTIKCSAVGNSHPPKMSWLLGSGLEIDAQPQSQYLLEKNTYSSLDILHVQSHKRR
VTVKCIVRHPALHNSSLMNFVKIGQNPSEESHSTSRTSHWPSTEGPTTVSRWPGTQVSTE
KPTATALDWPNTKRSPASTPDSQLSTHSQPAHSVFEATGYTLANDSSSNSTSTTGIFDET
ERQRGNGSSAPLLIFLVTCLILGLLVVVAFFVIKLRRAHILWKKENEDSDQSVESSRSKS
SNEEKQSRRRGNGLFNIGFTKYVVEEPMATETTTTTNTKTEEAPEIQVLPQTDGATLSPQ
IKETEL
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atgccactaaagctgcagctttgcttcctagtcttgtttgtagggggttccgttgcagtg
caacatatgaccgtgatggagggtgagactctaactattaagtgtcacattagaaatgct
cacaggagccacgtggaatggaagaatcctaacgggcatgtgatgtttttcaatgaccat
aaggccctgagggataagcgctacaagataatcaacttgtccgagtccgatttttcagtc
agtgtgtctgatgtcaccttcaaagatggaggcctctacacatgtttacattacacaaaa
gtgcctgtagtgaagtcagttaccgtgacagttttgggtatgccaaaattggagataaca
gaacacaatggaaagactaccatcaaatgttctgcagtgggaaatagccatcctcccaaa
atgtcatggcttttggggagtgggttagaaattgatgctcagcctcagtcccagtatctt
ttggaaaaaaacacatattcctccctggatatcttgcatgttcagtcccacaagaggaga
gtcacagtgaaatgcatcgttcgccatccagccttacacaattcttctctgatgaatttc
gtaaaaattggacagaatccctctgaggaatcacactccacttcgagaacctctcattgg
ccaagtacagaaggtccaacaacagtctcccgttggcctggtacacaggtgtcaacagaa
aaaccaacagctacagccttagattggcccaatacaaagcgttcaccagcatcaacccct
gactcacaactcagcactcacagtcagccagcccactcagtgtttgaagctacaggatac
acacttgctaatgacagcagtagcaactcaaccagtactacaggaatcttcgatgagacg
gagaggcagagaggaaatggaagcagtgcgccgttgctcatcttcctcgtgacgtgcctc
atccttggtctgctggtggtcgttgcattctttgtaatcaagctgaggagggctcacata
ctctggaagaaagaaaatgaagactctgatcaatctgtggagagcagcagatcaaaatca
agcaatgaagagaaacaatccagaagaaggggaaatggactttttaacattggattcaca
aagtatgtcgttgaggaaccaatggcaacagagacgacaacaacaacaaacaccaaaaca
gaagaggctcctgaaattcaagtcctcccacaaacagatggagcaaccctaagccctcag
atcaaggagacggaactgtaa
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