Oncorhynchus mykiss (rainbow trout): 100136243
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Entry
100136243 CDS
T07259
Symbol
sycp3
Name
(RefSeq) synaptonemal complex protein 3
KO
K19528
synaptonemal complex protein 3
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
100136243 (sycp3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
omy03036
]
100136243 (sycp3)
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
omy03037
]
100136243 (sycp3)
Chromosome and associated proteins [BR:
omy03036
]
Eukaryotic type
Meiosis-specific proteins
Synaptonemal complex
100136243 (sycp3)
Cilium and associated proteins [BR:
omy03037
]
Motile cilia and associated proteins
Sperm associated proteins
100136243 (sycp3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cor1
Peptidase_C65
UDPG_MGDP_dh
NusB
Motif
Other DBs
NCBI-GeneID:
100136243
NCBI-ProteinID:
NP_001117979
Ensembl:
ENSOMYG00000003523
UniProt:
Q6J4P1
LinkDB
All DBs
Position
2:complement(81314069..81323099)
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AA seq
238 aa
AA seq
DB search
MASTGRKQSKKTKHAEDSTDIKSFDFALEDEKTGLSCSEDDIREDETPVVTRWPKKSSFE
EDDLKVGVGNEVQTMLERFGADISKAMQAKRKRLETFTKSSLKGSNQKLEQLWNTQYAQR
QKLTQEYSQQVSSVLQQWEIDAQKSEDQEEKLNNLFRQQQKLFQQARVVQSQKLKTIKEL
YEQFIKNMEEMEKSHETFLQGAQVELKKEMAVLQKKVMMDTQQQEMATVRKSLQSMLF
NT seq
717 nt
NT seq
+upstream
nt +downstream
nt
atggcctccactgggagaaaacagtcaaagaaaacgaagcatgcagaagactcaactgac
ataaaatcgtttgatttcgctcttgaggacgaaaagacaggactgagttgttcagaggat
gacatccgagaagatgaaactcctgttgtgacaagatggccaaagaaaagttcatttgag
gaggatgatctaaaagttggagtggggaacgaggtacaaaccatgttggagagatttgga
gctgatataagcaaagccatgcaagccaagagaaaacgtttagagaccttcaccaagagc
tcactgaagggcagcaatcagaaactggagcagctgtggaatacccagtatgcacaaagg
cagaagctgactcaggagtactcacagcaggtgtcatctgtgctgcagcaatgggagatt
gatgcacagaaatcagaggatcaggaggaaaaattgaataacttgtttcgccagcaacaa
aaactgttccagcaggctagagtggtgcaaagccagaaactgaaaaccatcaaagagcta
tatgagcagttcattaagaacatggaggagatggagaagagccatgagaccttcttgcag
ggggcacaggtggagctgaagaaggagatggcagtgttgcagaagaaagttatgatggac
actcaacagcaagagatggccactgtccgcaagtctcttcaatctatgctgttctag
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