Oncorhynchus mykiss (rainbow trout): 100136246 Help Entry 100136246         CDS       T07259                                  Name (RefSeq) valosin containing protein   KO K13525   transitional endoplasmic reticulum ATPase Organism omy  Oncorhynchus mykiss (rainbow trout) Pathway omy04137   Mitophagy - animal omy04141   Protein processing in endoplasmic reticulum Brite KEGG Orthology (KO) [BR:omy00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    04141 Protein processing in endoplasmic reticulum     100136246  09140 Cellular Processes   09141 Transport and catabolism    04137 Mitophagy - animal     100136246  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:omy03019]     100136246    03009 Ribosome biogenesis [BR:omy03009]     100136246    04131 Membrane trafficking [BR:omy04131]     100136246   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:omy04147]     100136246 Messenger RNA biogenesis [BR:omy03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     Ran-mediated transport factors      100136246 Ribosome biogenesis [BR:omy03009]  Eukaryotic type   Pre-60S particles    Ribosome quality control proteins     100136246 Membrane trafficking [BR:omy04131]  SNARE   SNARE associated proteins    Others     100136246  Autophagy   Aggrephagy    Other aggrephagy associated proteins     100136246 Exosome [BR:omy04147]  Exosomal proteins   Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)    100136246 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  AAA AAA_lid_3 RuvB_N AAA_16 CDC48_2 CDC48_N AAA_33 AAA_5 AAA_2 AAA_22 TIP49 AAA_14 NPHP3_N RNA_helicase Vps4_C nSTAND3 AAA_28 Parvo_NS1 Mg_chelatase AAA_17 ATPase_2 IstB_IS21 AAA_18 AAA_7 ATPase DUF815 ABC_tran AAA_24 NB-ARC TsaE ResIII NACHT Sigma54_activat Viral_helicase1 SLFN-g3_helicase KAP_NTPase Zot DUF3944 Motif Other DBs NCBI-GeneID:  100136246 NCBI-ProteinID:  NP_001117982 Ensembl:  ENSOMYG00000037945 UniProt:  Q1M179 LinkDB All DBs Position 5:17126356..17147778 Genome browser AA seq 748 aa AA seqDB search MKGKKRRETVCIVLSDDTCSDEKVRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLP IDDTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPNPYCIVAP DTVIHCEGEPIKREDEEESLNEVGYDDIGGVRKQLAQIKEMVELPLRHPALFKAIGVKPP RGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAP AIIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDAALR RFGRFDREVDIGIPDATGRLEILQIHTKNMKLSDDVDLEQVANQTHGHVGADLAALCSEA ALQAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPNISWED IGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQAN FISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNAGDGGGAAD RVINQILTEMDGMSSKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRINILG ANLRKSPIAKDVDLDFLAKMTNGFSGADLTEICQRACKMAIRESIENEIRRERERQTNPS AMEVEEDDPVPEIRKDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFGSFRFPTNSA PGAGPSQGSAGGSGGTVFNEDNDDDLYG NT seq 2247 nt NT seq  +upstreamnt  +downstreamnt atgaaaggaaagaagagacgggagacggtctgcatcgtgctctctgatgacacctgctcc gacgagaaggtccgcatgaacagagtggtccgcaacaacctaagagtccgcctaggagat gttatcagtattcagccatgcccagacgtgaagtacgggaagcggatccacgttctgccc attgatgacactgtggaggggatcacaggaaacctgtttgaggtctacctcaagccctac ttcctggaggcctacaggcccatcaggaaaggggacatcttcctggtgaggggaggcatg cgagctgtggagttcaaggtagtggagacagaccccaacccctactgcattgtggcccca gacacagtcatccactgtgagggggagcccatcaaacgagaggatgaagaggagtctctg aatgaggttggctatgatgacattggtggtgtgaggaagcagctggcccagattaaggag atggtggagctgcccctgagacacccagcactgttcaaggccatcggcgtcaagcctcca aggggaatcctgctgtacggaccccctggaacaggaaagactctgatcgcccgtgctgtg gcgaatgagactggagccttctttttccttatcaatgggcctgagatcatgagtaaactg gccggagagtctgagagtaacctgaggaaggccttcgaggaggctgagaagaatgcccct gccatcatcttcattgatgagctggacgccattgcaccaaaaagagaaaagacacacggt gaggtggagaggcgtatcgtgtcccagctcctcacactcatggacggccttaagcagcgt gctcacgtcatcgtcatggcagccaccaacagacccaacagcattgacgccgccctcagg cgatttgggcgttttgacagggaggtggacattgggattcctgacgcaacaggcagactg gagatccttcagatccataccaagaacatgaaactgtccgacgatgttgacctcgagcag gttgccaatcagactcacggccacgtgggtgctgacctggctgctctgtgctctgaagcc gccctgcaggccatccggaagaagatggatctcatcgaccttgaggacgagaccatcgac gcagaggtcatgaactcccttgccgtcaccatggacgacttcagatgggctctgagccag agcaacccatctgccctgagagagactgtggtggaggtgcccaacatcagctgggaggac atcggtggtctggaggatgtcaagagggaactccaggagcttgtacagtacccagtggag cacccagacaagttcttgaagttcggcatgaccccatccaagggcgtgctgttctacgga cccccaggttgcggtaagaccctgctggccaaggccatcgccaacgagtgccaggccaac ttcatctccatcaaagggcccgagttgctcaccatgtggttcggcgagtctgaggccaat gtccgagagatctttgacaaggctcgccaggccgccccctgcgtgctcttctttgacgag ctggactccatcgccaaggcgcgtggcggcaacgcgggtgatggtggcggagcagccgac cgtgtcatcaaccagatcctgacggagatggacggcatgtccagcaagaagaacgtcttc atcatcggcgccaccaacaggcctgatatcatcgacccggccatcctgaggcccggcaga ctggaccagctcatctacatccccctgccagatgagaagtcccgcatcaacatcctcgga gccaacctcaggaagtcacccatcgccaaggatgtggacctggatttcttggccaagatg accaatggtttctctggagctgacctgacagagatctgccagagggcctgtaagatggcc atcagggagtccatcgagaacgagatcaggagggaaagggagaggcagaccaacccctca gccatggaggtggaggaggacgaccctgtcccagagatccgtaaggaccattttgaggag gccatgcgtttcgcccgccgctccgtcagcgacaacgacatccgcaaatacgagatgttc gcccagacgttacagcagagcagaggcttcggaagtttccggttccccactaactctgcg ccaggggccgggcccagccagggctctgctggtggcagcggtggcacagtcttcaacgag gacaacgacgacgacctctatggttaa

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