Oncorhynchus mykiss (rainbow trout): 100136262
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Entry
100136262 CDS
T07259
Name
(RefSeq) TP53-binding protein 1 isoform X1
KO
K20915
tumor suppressor p53-binding protein 1
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
100136262
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
53-BP1_Tudor
BRCT_3
BRCT_2
Tudor_5
BRCT
DUF4537
RTT107_BRCT_5
SH3_Hsr9
Tudor_2
Motif
Other DBs
NCBI-GeneID:
100136262
NCBI-ProteinID:
XP_036819802
LinkDB
All DBs
Position
26:42053349..42118431
Genome browser
AA seq
1893 aa
AA seq
DB search
MDPSGSDLDSSLPHAENPCLIVEDSQPDSAALEDDPDSSYRALLARRLSSLQPATSHSPV
LELMSSPAGNRYSETDSQSERVQNNNHNGPVNQEESQVLEVCSNTRRCSTEDMATESGAD
STTHCAQPEGGVSKLDFLELSESQGPGEVVGNSQEEEGPTAAQTDSQRHNQPGEQKNTTR
GLPSGSQDRKSKRSEVSSSSSSEPLGRAGRELSVQALLHSQGLQASEDQGPKGEDSELLS
SQEDLFDTDKTGTGVDSTMSEAENQGVPTLTPAHTLRLLHLSGQGTLVQESLSQNSEFVA
PTQENLSQTPFIVPNSPTGQENELGADESMDTSMPPEDQSDGKEEEPMDPAPKSHPSAST
PVSQNSPGFVLERTLSLPTQPELSHDVFVPTQSQEAGSSSIAPQETHSRKVTSSSQPTAL
DSSSPKMAAAPAQSKAPTTTDREHSVIDSFQLELSVNTQSCSLAQQASMQAGGKDVEEDS
QATQIEEGLDGRLRIDTSDSVISRNSQKRESNGVPSDPKTPAILPKVPQVPDLLKTSGES
TRREECSTSQKSDTHKQTTLNVRNVNIGDDGINVTKTESSQKQDAKASSPSPSSQQKLET
IDLFTPSSCVQETPSSSNSAACSLASLSQSQSQSVFPQRSHVGSVKALSPSPGVCVDSRR
DGGGRRDIGEAGGGGSPTSSQKNRDPSKSIQSLSQEHGGTATNSPKEKNKADEEGMEEGG
EKQHDSTLGPEGSGLYLSLSQSQVLSPEPMEEEEEEKIGKFPVSHSSSEGGVGEEESCSS
IIVLEESERSSQLLEKEVKSPSNMGTSQPVASRRGSVSSNGTGSQLKDTQLVPIGLTQAD
KEGSREAEGLRDKSLSDSSGEIPFHFTLPKEGELIGPPVSATPPLISQLKQTPRHSTPID
MTSFSEKSAAVGDVSTETAMATSEITAGESGEDTTDGADGKLSLRMKLVTPVEEGSSEHF
SLQKPPQSDEEGSVSKVTTVVKAVTSVPVPSPLPSPSVFSRVREAHRQVMEDQAEAHPSD
PGTPVRGELFSSPSQQKSSQRPSIPSLSLECISLPNSQSEPLSSPRQEVKHTLPLGLREK
EPPAEPSTPGRPAVKTPQKGTAAGDREPCGPPEPSTPTRAAAIRQRAVSQQTSFDNTISP
SSPSKLCQRVAFQQTSFEAAGPRSPAASGEPETPPSRAAAGPAHRRHVRTIQEVRTTVTR
IITDVYYEDGREVDCKVTEESEEPVVDSRVLESDISPCRTGSSMTSGDLGDVSSLSSKAS
SLQHSSGGTSIVTGPAQRGPEFIMPPSRGAKSVSPRRGSGPQQRGHRGQTAGSEFMSERV
QGLHGSRAFTPLTPRGRARRGRPPSRSPLSRGAGVPRTNARGQPLSSSEDEPYTRLCPTP
HIPDSPAVPSHSSTSLLTTISQDESSPAGSSFVGLRVVAKWSSNGYFYSGRITKDLGEGR
YRLLFDDSYECEVTGKDILLCDPIPLDTEVTALLEDEYFSTGRVKDYKKEGEDLFYSVEK
QGQTTAVEREGQTTAVEREGQTTATTAVERQWYSRSSVILTMEQGNRLREQYGLGPYEPS
TPLAKASDISLDNLVEGKRRRRGITGGASPLTPGPSGKRKLISSEDRDRTPAKRGRRGGA
RAGQRVGVCNTSGSGTDLPWDHSDLAETHGPLPQSASLFVGFVFMLTASSESDRQTNQPI
SDGEEEYVQTAPYHKRYTETQLEAGAGFILNDFNEEQCKAAYQSLLITDQHSRTRKYLLC
VASGVPCVSHIWVRDCCKEGKLLNYRNYLLPAGVGPDERIVEWHPRCSPFKALRVLLVFE
EPAELWSELLMMSGASSVRQHQAEKDSSDIPVGKFDVVVTDRTCPPLVLKSVTSQEVPMV
SPEWLIHSLICGERLGYHSNPQYRHDYTSPPSS
NT seq
5682 nt
NT seq
+upstream
nt +downstream
nt
atggatcctagcggaagtgacctggattcgagtctgccccatgcagagaacccgtgcttg
atcgtggaggactcccagcccgacagtgcggcactggaggacgacccggacagtagctac
cgcgccttgctcgcccgccgcttgtccagcctgcagcctgccacctcccacagccctgta
ctggagctgatgtcctctccggcaggaaaccgatactccgagacagacagccaatcagag
agggtccagaacaacaatcacaacgggccagtcaaccaggaggaaagtcaagtcctagaa
gtttgctccaatacaaggaggtgttctacagaagacatggccacggagtctggggcggac
tccactacacactgcgcccagcctgaagggggagtgtccaagttagattttctggagctt
tctgagagccagggtccgggtgaagtggtggggaacagtcaggaggaggagggccctact
gctgcccagacagacagccagagacacaaccagccaggtgaacagaagaacacaaccagg
ggcttgccttcaggcagtcaggacagaaaatccaagaggtcggaggtgagctctagcagc
tcgtcggagcccctgggtcgtgccggccgggaactgagtgtccaggctttgctccactcc
cagggcctgcaggcctccgaggaccagggtcctaaaggggaagactctgagctgctgtcc
tctcaggaggacctcttcgacactgacaagacaggcacaggggtggacagcacaatgtca
gaggcagagaaccaaggtgtgcccaccctgacccctgcccacaccctgcgtctgctgcac
ctctctgggcagggcaccctggtgcaggagagcctctcccaaaactctgagtttgtagca
cccacccaggaaaacttgagccaaacacctttcatcgtccccaattcaccgacaggacaa
gaaaatgaactgggtgccgacgaatcaatggacacgtctatgcctccggaggaccaatcg
gatggtaaggaggaggagccaatggacccagctcctaagtcacacccctcggcatccacc
ccagtatcccagaactccccaggttttgtgttggagaggaccctctctctgcctacccag
cctgagttatctcatgatgtatttgtcccaacgcagagccaagaggctggaagcagtagc
atagctccacaagagacgcacagcaggaaagtgacatcatcatcccaacccacagccctg
gattcaagctcacccaagatggccgctgcacccgcccagtccaaagcacccacaacaact
gaccgagaacactctgtgattgattctttccaactagagctgtctgtgaatactcagagc
tgtagtctggcccagcaggcttccatgcaggctggagggaaggatgtcgaggaggacagt
caggctacacagatagaagaaggtctggacggacgcctacggatagacaccagtgactct
gtgatttcacgtaacagccagaagagggaaagtaacggggtcccctctgacccaaaaaca
cctgctattttgcctaaagttcctcaggtgcctgacttactgaagactagcggggaaagt
accaggagagaggaatgtagcacatcacagaagtctgacacgcacaaacagacaaccttg
aatgtacgcaacgtgaatataggcgacgatggtatcaatgtgaccaaaacagagagttct
cagaagcaggatgccaaggcctcttccccctctccttcctcccaacagaagcttgaaacc
atagacttattcacccctagcagctgtgtgcaggagacgccttcttcctcgaatagcgct
gcctgtagtttagcctccctgtctcagtctcaatcccagtctgttttcccacagaggtct
cacgtgggatcagtgaaggctctctctccgagtccaggtgtttgtgtagactccagaaga
gatggaggaggaaggagagacataggagaagcaggaggagggggaagcccgacgagctca
cagaaaaaccgggacccgtctaaatccatacagtctttatcgcaggagcatggaggcact
gctaccaacagcccaaaggagaaaaacaaagcagatgaagaagggatggaggagggggga
gagaagcagcacgacagcacgttggggcccgagggctcaggcctctatctgtctctctct
cagagccaggtgctttctccagagcccatggaggaagaagaggaggaaaaaatagggaag
ttccctgtctcgcactccagtagcgagggaggagtaggagaggaggagagctgcagcagc
atcattgtgctggaggagagtgagaggagctcccagctactggagaaggaagtgaagtcg
ccgtctaacatgggcacgtctcagccagtggcaagccggcgggggtcagtgtcgtccaat
ggcacagggtcacagctgaaggacacccagctggtaccaatcggactcacccaggctgat
aaggaagggtctagggaagcagaggggctccgagacaagagcctcagtgacagctctgga
gagattccattccacttcactctccccaaagaaggcgagctgattggccctcctgtgagt
gccactccccctctgatcagccagttgaagcagacaccaagacacagcactccgattgac
atgacttccttctctgagaagtccgcggcggtgggtgatgtttccacggagacggcgatg
gcgaccagtgaaatcacggcgggggagagtggcgaggacacgaccgacggggctgatggg
aaactgagtttgcggatgaagctggtgacccctgtagaggagggcagctcagaacacttc
agcctgcagaagccaccgcaatcagacgaggaaggctctgtctccaaggttaccaccgtt
gtcaaggctgtaaccagtgtccctgtccccagccccctgcccagcccctctgtgttcagc
agggtgagggaggcccacagacaggtgatggaggaccaggccgaggcccatcccagtgac
cctggaacccctgtcagaggggaactgttcagctcaccctcacagcagaaaagctcccaa
agaccctccatcccctctctctccctggaatgcatcagcctccccaacagccaatccgag
cccctctccagcccccgccaggaagtgaagcatacgttgccattggggctcagagagaaa
gagcctcctgctgaaccatccaccccaggccgtccagcagtgaaaacaccacaaaaaggc
accgcagctggggatagagagccgtgtgggcccccggagccatccacccccaccagagcc
gctgccatcagacagagggccgtgtcccagcagacaagctttgacaacaccatctctccc
agttcacccagtaagctttgtcagagagtggcgtttcagcagaccagttttgaagcggct
ggccccaggtctccagcagccagcggcgagccagagaccccaccctcgagggcagctgct
ggtcccgcccatcgcagacacgtgcggaccattcaggaagtgcggacgacggtcacacgc
atcatcacagacgtgtactacgaggacgggagagaggtggactgtaaggtcactgaggag
tcggaggagccggtggtggacagccgtgtgttggaaagcgacatctctccgtgtcgcacc
ggcagctccatgacctccggtgacctgggtgatgtcagctctctgtcctccaaagcttcc
agcctgcagcacagctccgggggcaccagcatagtcacgggtcctgcccagaggggccct
gagtttatcatgcctcccagccgaggggccaagtctgtcagccccaggagggggagtggg
ccacagcagaggggccacaggggtcaaacggcagggtcagagttcatgagcgagagagtt
caaggactccatgggtcacgggcattcaccccattgacgccccgcggaagagccaggagg
ggcagacctccatcccgctcacccctgtccaggggtgccggcgtccctcgtaccaatgcc
cgcggccaaccactgtcctcctccgaggatgagccctacacccgcctgtgtcccaccccg
cacatcccagacagcccagcggtccccagccactcctccacgtctctcctcaccaccatt
tcccaagatgaaagcagcccagctgggagcagcttcgtggggcttcgcgtggtggccaag
tggtccagcaacggctacttctactcaggccgcatcaccaaggacctgggcgaggggcgt
taccggctgctcttcgatgacagctatgagtgcgaggtcacgggcaaggacatcctgctg
tgcgaccccatccccctggacactgaggtcacggcactgctggaggacgagtacttcagc
acaggtcgagtgaaggactacaagaaggagggcgaggacttgttctacagtgtggagaag
cagggccagactacagctgtagagagggagggccagactacagctgtagagagggagggc
cagactacagccactacagctgtagagaggcagtggtacagccgcagttctgtcatcctg
accatggagcaaggcaacaggctgagagaacagtacggcctgggaccctacgagccctcc
acaccccttgccaaggcctctgatatcagcctggataacctggtggaggggaagaggaga
cgcagggggatcacagggggggccagccccctcacccctggcccctctgggaagaggaag
ctgatcagctctgaggacagggacaggaccccggctaagcgaggccgcagagggggagcc
agagccggtcagcgggttggtgtgtgtaacacctcaggcagtggcaccgacctgccctgg
gaccatagtgacctggcggagactcacggcccgctgccccagagtgcatctctcttcgtg
ggctttgtcttcatgctgaccgcatcatcagagagcgaccgccagaccaaccagccaatc
agcgatggcgaggaggagtatgtgcagacggccccctatcacaaacgctacactgagaca
cagctggaggccggagcaggcttcatcctcaacgacttcaacgaggaacagtgcaaggcg
gcctatcagagcctgctgatcaccgaccagcatagccgaaccaggaagtacctgctgtgt
gtggccagtggtgtgccgtgtgtgtctcacatctgggtgagggactgttgcaaggagggc
aagctgctcaactacaggaactacctgctgcccgccggagtgggccctgacgagcgcata
gtggaatggcatccgcgctgcagcccgtttaaggccctgcgggtcctgttggtatttgag
gagccggcggagctgtggtctgagctgctgatgatgagtggagcttcctctgtgagacag
catcaagcagaaaaggacagctctgacattcctgtgggcaagtttgatgtggtggtcaca
gaccgcacctgtccaccattggttctgaagagtgtgacatcacaggaagtacccatggtg
tcgcccgagtggctaatccacagtctaatctgtggggagcgcctgggataccatagcaac
ccccaatatcgtcatgactacacatccccaccctcatcctaa
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