Oncorhynchus mykiss (rainbow trout): 100136325
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Entry
100136325 CDS
T07259
Name
(RefSeq) tapasin
KO
K08058
TAP binding protein (tapasin)
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
100136325
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Gene cluster
GFIT
Motif
Pfam:
V-set
Ig_3
Ig_2
KOW6_SPT5
ig
I-set
Motif
Other DBs
NCBI-GeneID:
100136325
NCBI-ProteinID:
XP_021416251
Ensembl:
ENSOMYG00000025425
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Position
32:33428998..33433876
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AA seq
331 aa
AA seq
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MTNISIILQSFLAFSYVMHVYGTSCPVLECWFVQEKPGGGFHAAMSQEKSLLYINTDPDS
EETRSKQGPPTDHDRVYYVTDPAATLCSSSLHPPEGSVQKSQCEINPFMPQPSTVQWTVP
LTDSAHSPIYLQADWYTAALQGFDGQLRLSNVLRAPTATKEPKVVLSVSSRTFMIRSRLG
EPVVLDCGFWVDASSPLSGSGFAVEWRYQFRGDGRLVLAYDGKSDRFAETQEEGVGLDFT
ALHETGDASLILQEAQVRHSGTYICTVYLPYLLAQVAVELEIVGHPANLTQLCEALVIMG
QHPCGTVSTPCRVHARQPDAVLRAKGGATQY
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atgaccaatatatcaataatattgcaatcctttcttgcctttagttacgttatgcacgtc
tatggaacaagttgtccagttctggagtgctggtttgtccaggagaagccaggtgggggc
ttccatgctgctatgagccaggagaagtcactactttacatcaatacagacccagacagt
gaagaaaccaggtcaaagcagggaccacctacagaccatgatagagtctactacgtcact
gacccagcagctaccctctgcagttcttctctgcacccaccagaaggctcagtccagaag
tcacagtgtgagatcaaccccttcatgcctcagccatccactgtccaatggacagtccca
ctcacggactctgcccacagtccgatctacctgcaagccgactggtacactgctgccttg
cagggctttgacggacagctgcgcctctccaatgtcttgcgtgctcccacggcaaccaag
gaacccaaggtggtgctcagtgtgtccagtagaaccttcatgatccgttccagactcggg
gaaccagttgttctagactgtgggttctgggtggatgcctcttctcctctctctggctct
ggcttcgccgtggagtggcgctaccagttcaggggcgatggccgtctggtcctggcctac
gacggcaagagtgaccgatttgcagagacccaggaagagggagtggggctagacttcacg
gctctgcacgagacaggagatgcatcactgatcctgcaggaagctcaagtgcgccactca
ggaacctacatctgcacggtgtacttgccctatctcttggctcaggtggcagtggagctg
gagattgtaggacatccagccaacttgacacaactgtgtgaagcattggtcatcatgggc
cagcatccctgtggaacggtttcgacaccttgtagagtccatgcccgacaacctgatgct
gttctgagggcaaaagggggtgcaactcaatattag
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