Oncorhynchus mykiss (rainbow trout): 100136656
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Entry
100136656 CDS
T07259
Symbol
cacna1b
Name
(RefSeq) neuronal-type voltage-gated calcium channel subunit Cav2.2
KO
K04849
voltage-dependent calcium channel N type alpha-1B
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04010
MAPK signaling pathway
omy04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
100136656 (cacna1b)
04020 Calcium signaling pathway
100136656 (cacna1b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
omy04040
]
100136656 (cacna1b)
Ion channels [BR:
omy04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
100136656 (cacna1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
GPHH
Ca_chan_IQ
PKD_channel
Motif
Other DBs
NCBI-GeneID:
100136656
NCBI-ProteinID:
NP_001118101
Ensembl:
ENSOMYG00000020137
UniProt:
Q7T1M1
LinkDB
All DBs
Position
5:25672900..25792999
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AA seq
2365 aa
AA seq
DB search
MARFEEELSNRRGGVCQAGPPRGAGRPAGPPSGPRVYKQSMAQRARTMAIYNPIPVKQSC
LTVNRSLFIFSEDCIIRKYAKKITEWPPFEYLILATIIANCIVLALEQHLPASDKTPMSE
RLDDTEPYFIAIFCFEAGIKIIALGFAFHKGSYLRNGWNVMDFVVVLTGMLATVGADFDL
RTLRAVRVLRPLKLVSGIPSLQVVLKSIMKAMVPLLQIGMLLFFAILMFAIIGLDFYMGK
FHRTCFRTDTGEQAAEFPCGLEAPARTCENGTVCQEYWIGPTYGITNFDNILFAVLSVFQ
CITMEGWVDILYNANDASGNTWNWLYFIPLIIIGSFFMLNLVLGVLSGEFAKERERVEKR
QDFLKLRRQQQIERELTGYLEWICKAEEVLLEEEDENAEEKSPLDVLKRGKVKKSKNDLI
GAEEGEDHFTDMSSVAPPGSPFGRASVKSSKLESSSYFRRKERRMRFFIRRMVKAQSFYW
IVLCLVGLNTLCVAIVHYDQPEWLTTGLYLAEFVFLGLFLSEMSLKMYGLGARNYFHSSF
NCFDFSVIIGSILEVVWSMIKPGASYGISVLRALRLLRLFKFTKYWNSLRNLVVSLLNSM
KSIISLLFLLFLFIVVFALLGMQLFGGQFNFEEETPTTNFDTFPAAILTVFQILTGEDWN
AVMYHGIESQGGVRRGMFSSVYFIVLTLFGNYTLLNVFLAIAVDNLANAQELTKDEEKQE
EEANKKLALQKAMEVKEVSPVSAANISIAVFVKQNRDARSRSSSVSSVHSPKEQQRANKI
MSVWEQRTNQLRQNNLRASSEALFNELDPEERLRVSSALHLRPDMKTHNDRPLVVEPGNG
DNPRPPEEDRDGADPQQEGGEPHGPQPRKHYRHRERNGEIGESRHHTHHSRSRDHYHPDG
PRSKEGKVERNHSREGGQGHRHHHQAESPEEGVNGGGEGREDRHHHSDRQGNGALATRDR
LESRGRGHREENGERRKHRSRRVRAQSTLDGDECRENGERNGDGDQGHRDRQTDSQGESL
ATSPVQPPAGLQAGEKQEDADNQKNSHRASQAGLNSNTVHIPVTITAPSRETTIIPMDNI
DCESLPLNKEKKDLEEELKNGPKHILPYSSMFVFGQTNPVRRLCHYVVNLRYFEMCILSV
ITMSSIALAAEDPVQANAPRNNVLKYLDYVFTGVFTFEMVIKMIDLGLLLHPGSYFRDLW
NILDFIVVSGALVAFACSGTKGKDINTIKSLRVLRVLRPLKTIKRLPKLKAVFDCVVNSL
KNVLNILIVYMLFMFIFAVIAVQLFKGKFFYCTDESKGLEKDCRGKFLDYDGDEVAAQDR
EWRKYEFHYDNVLWAFLTLFTVSTGEGWPMVLKHSVDATYEDEGPSPGFRMETSIFYVVY
FVVFPFFFVNIFVALIIITFQEQGDKAMSECSLEKNERACIDFAINAKPLTRYMPADKQS
FQYKMWQFVVSPPFEYSIMTMIMTMIALNTVVLMMKFHGAPELYEAMLKHLNIVFTALFT
LECILKIIAFGPLNYLKAAWNVFDFVTVLGSITDILVTEIKTDKLINLSFLRLFRAARLI
KLLRQGYTIRILLWTFVQSFKGLPYVCLLIAMLFFIYAIIGMQVFGNIELNEETAINPHN
NFRTFFQALMLLFRSATGEAWHEIMLSCLSNRPCDKLSGSGGKECGSDFAYFYFVSFIFL
CSFLMLNLFVAVIMDNFEYLTRDASILGPHHLDEFIRVWAEYDPAACGRMTYLDMYEMLR
HMSPPLGLGKKCPPRIAYKRLVKMNMPIADDNTVHFTSTLMALIRTALEIKLASGVLAQR
LCDADLRKEISRVWPNLPQKTIDLLVTPYKNDEFNELLCPFAVVNRELTVGKVYAALMIF
DYYKQNRAKRLEQQLGLDFTGTIKNKKGPAFFRPMMPMTHMQEEGTTVAGANPLPSSQPE
PESQPEPTPSTTSLTNGEAVPSTRSPIKESGEQLSQEGQRSSSRKRILQRGQSEDVPYSN
KPQESVEMRQVENGADIGGYSGLDGHGRAASMPRLDSQYNRTHPRHRPGSYLAPIADISP
IRRSASTLASQCHREMSLRVYTLERPSQAQASSAPGQAQDRPHHHHHHRCHRRRDKDRDK
KQKSLDRATSVQPSSTACSSVDPPVEGLTRARECDRGRPHEKRHHSAAGETKRYYSCERY
VGREHCHTKSAGPSRSTSPGETHDLGLLKQSIRMSKGSQVVLTFGSSPSCRGRRQLPQTP
LTPRPAVAYKTGNSLPMQFGSTGHQSFLSRGLSERNALLESPPIPVTLIGLDPNLSPCPR
NPPPCRLSEEPDDFQDAVSNHGGSHSPRIIASASHGAAGPSSAPAPQGRVGIPNGYHFTL
GVNAVSSSSPRGTGSFREKEEDDWC
NT seq
7098 nt
NT seq
+upstream
nt +downstream
nt
atggctcgattcgaagaggaactatctaatcggcgtggaggggtctgtcaagcgggccca
ccaaggggggcaggtcggccagcaggccccccaagcggccctagggtgtacaaacaatca
atggcccaaagagccaggacaatggccatttacaaccccatccctgtcaagcagagctgt
cttactgtcaaccggtctctcttcatctttagtgaggactgtatcatacggaaatatgcc
aaaaagattaccgaatggcctccatttgaatacctgatcctggccaccattatagccaac
tgcatcgtccttgccttggagcagcacctaccagccagcgacaaaacccccatgtcagag
cgcctggacgacacagagccctattttattgcaatattttgttttgaagctggcattaag
atcatcgcccttggttttgcgtttcacaaaggctcctatcttcggaatggctggaatgta
atggactttgtggtggtactaacagggatgctggctacagtgggagcagactttgacttg
agaactctgagggcagtacgggtcctgaggccactgaaactggtgtctggaatccctagt
cttcaggtagttctaaagtccatcatgaaagccatggtgcctctgctgcagattggcatg
ctgctcttcttcgctatcctcatgttcgccatcatcggcctggacttttacatgggcaag
ttccaccggacctgcttcaggactgatacaggtgagcaggcagcagagttcccctgtggt
ttggaggctccagcgaggacctgtgaaaatggaactgtgtgtcaggaatactggatcggc
ccaacttacggcatcaccaactttgacaacatcctctttgctgtactatctgtcttccag
tgcatcaccatggagggatgggtggacatcctctacaatgctaatgatgcctcggggaac
acctggaactggctctacttcatccccctgatcatcatcggatccttcttcatgctcaac
ttggtcctgggtgtcttatcaggggagtttgccaaagaaagagagcgtgtggagaagagg
caggactttctaaagctgcgcagacagcagcagatagagagagagctgacaggatacctg
gagtggatatgcaaggcagaggaggtgctgctggaggaggaggatgagaacgcggaggag
aagtcccctctggacgtgttgaaacgtggcaaggtaaagaagagtaagaatgacctgatt
ggtgctgaggagggagaggatcacttcactgacatgtcctctgttgcccccccaggctct
ccgtttggccgagccagtgtgaagagcagtaagctggagagctcgtcctacttccgccgc
aaggagaggagaatgcgtttcttcatccggcgcatggtcaaagcccagagcttctactgg
atagtactatgtctggtgggcctcaacacactgtgtgtggccatcgtccactacgaccag
cctgagtggctcaccactggcctctacctggcagagtttgtgttcctgggtctgttcctg
tctgagatgagcctgaagatgtatggcctgggagccaggaactacttccattcctctttc
aactgcttcgactttagtgtgataatagggagtatacttgaggtggtgtggtctatgatc
aaaccaggggcatcctatggcattagtgtgctgagggctcttcgtctgctcaggttgttc
aagtttaccaagtactggaactccctgaggaacctggtagtgtctcttctcaactcaatg
aagtccattatcagcttgctcttcctcctcttcctcttcatcgttgtctttgccctgctg
ggcatgcagctctttggaggacagtttaattttgaagaggagacgccgacgaccaacttc
gacactttcccggcggccattctcaccgtcttccagattttgactggcgaggattggaat
gcagtgatgtatcatgggattgagtcccaggggggcgtacggcgggggatgttctcctcg
gtctacttcatcgtcctcacactctttggaaactacacgctcctgaatgtcttcttagct
atcgccgtcgacaacctcgccaatgcacaggagctcaccaaggatgaggagaagcaggag
gaagaagccaataagaagctggccctgcagaaggccatggaggtgaaggaggtcagcccc
gtgtcagcagctaacatctccatcgctgtttttgtaaagcaaaatcgagatgcacgctct
cgcagctcgtccgtctccagcgtgcattcacctaaggagcagcagagagccaataagata
atgtcagtgtgggagcagcgcaccaaccagctgcgtcaaaacaacttgagggccagctca
gaggctctgttcaacgagctggacccagaggaacgcctgcgtgtctcctccgcccttcac
ctgcgccccgatatgaagacccacaacgaccgccccctagtggtggagccaggtaacggg
gacaatccccgaccccccgaggaggacagagacggagcagacccccagcaagagggagga
gagccccacggtccacagccacgcaagcactaccgtcaccgggagaggaacggggagatt
ggggagagcaggcatcacacccaccacagccgcagtagggaccactaccacccagacggg
ccccggtccaaagagggcaaggtggagaggaaccatagtcgagagggggggcagggccac
aggcaccatcaccaggctgaatccccagaggagggggttaacggagggggagagggaagg
gaagaccgccaccaccactccgacagacaggggaacggggccctggctaccagggacaga
ctggagagcaggggccggggccacagggaagagaacggagaaaggaggaagcaccgctca
cgcagagtcagggcccagtcaacactggatggagacgagtgcagagagaacggagagaga
aatggagacggggaccaaggacacagggacaggcagaccgactctcaaggggagagcttg
gccaccagtcctgtgcagcctcctgcaggtctgcaggctggagagaagcaagaggatgct
gacaaccagaagaacagccacagagccagccaggcaggcctgaacagcaacactgtccac
atccctgtcaccatcaccgccccatccagagagaccaccatcatacccatggataacata
gactgtgagagcctccccctgaacaaggagaagaaggacttggaggaggagctgaagaac
ggccccaaacacattctcccctacagctccatgtttgtgtttggacagaccaacccggtg
cgtcggctgtgccactacgtggtgaacctgcgttactttgagatgtgtatcctgtcggtc
atcaccatgagcagcatagccctggctgctgaagaccctgtgcaggccaatgcaccacgc
aacaacgtgctcaagtatctggactacgtcttcacaggagtgttcacctttgagatggtg
attaagatgatagacctgggactgctccttcatcctggttcttacttccgggacctgtgg
aacatcctggactttattgtggtcagtggagctctggtggcgtttgcctgctcaggaact
aaaggcaaggacatcaacaccatcaagtccctcagagtgctgcgagttctaaggcctctg
aagaccatcaaacgactgccaaaactcaaggccgtgtttgactgtgtcgtgaactctctg
aagaacgtgctcaacatcctcattgtctacatgctcttcatgttcatcttcgctgtgatc
gctgtgcagctgttcaagggcaagttcttctactgtaccgacgagtctaaaggtctggag
aaggactgcaggggtaagttcctggactatgacggtgatgaggtggcggcccaggatcgt
gagtggaggaagtatgagttccattatgacaatgtgctgtgggccttcctcaccctattc
actgtctccaccggggaaggctggccaatggtcctaaagcattctgtggatgccacctat
gaagatgaaggtcccagcccaggcttccgtatggagacctctatcttctatgtggtctac
tttgtggtctttcccttcttctttgtcaacatctttgtggctttgatcatcatcaccttc
caggagcagggagacaaggccatgtcagagtgtagtctggagaagaacgagagagcttgt
atcgactttgccatcaacgccaagcctctgacgcgctacatgccagcagacaagcagtcg
ttccagtataagatgtggcagtttgtggtgtcgccgccctttgagtactccatcatgacc
atgatcatgaccatgatcgcactcaacactgtggtgctgatgatgaagtttcacggtgct
ccggagctgtatgaggccatgctgaagcacctgaacattgtgttcacagctctcttcaca
ctagagtgcatcctcaagatcatcgctttcggaccactgaattacttgaaggcagcttgg
aacgtgtttgactttgtgacagtattggggagtatcacagacatcttggtcacagagatt
aagacggacaagctgatcaatctgagtttcttgaggctgttcagggcggccaggctcatc
aagctgctgaggcagggctacaccattcgcatcctactatggacctttgtccagtccttc
aagggcctaccttacgtctgcctcctcatcgctatgctcttcttcatctacgccatcatc
ggcatgcaggtgtttggaaacattgagctgaatgaagaaacagccatcaatccccacaac
aactttcgaaccttcttccaggctctgatgcttctgttcaggagtgcaacaggtgaggcg
tggcatgagatcatgctgtcgtgtctgagtaaccgtccgtgtgataagctgtcagggtcc
ggagggaaggagtgcggcagtgactttgcttacttctactttgtctccttcatcttcctc
tgctcctttctgatgctcaatctgtttgtggcggtcatcatggacaactttgagtacctg
accagagacgcctctatcctggggcctcaccacctggacgaattcatccgtgtttgggcc
gagtacgaccctgctgcctgtggccgtatgacctacctcgatatgtacgagatgctccgt
cacatgtcccctccactaggtttgggaaagaaatgcccgcccagaatcgcctacaagcga
ttggttaagatgaacatgcccattgctgatgacaatacggtgcacttcacgtccactctg
atggcgctcatccgcactgctctggagatcaaactggcgtctggagtcctggcccagcgt
ctgtgtgacgctgacctgaggaaagagatctccagagtctggcccaacctgcctcagaag
actatcgacctgctggtcacaccatataaaaatgatgagttcaatgagcttctttgcccc
tttgcggttgtaaaccgagagctgacagtggggaaggtctacgctgccctcatgatcttt
gactactacaagcagaaccgggccaagagactggaacagcaactgggactggactttaca
gggacaattaagaataaaaagggcccagccttcttccgcccaatgatgcccatgacccat
atgcaggaggaggggacaacagtcgccggagccaatcccctgccatcctcccaacctgaa
ccagagtctcagccagagcccacgccatccaccacctctctaaccaatggggaagcagta
ccaagcactagaagtcccataaaagagtcaggagagcaactgtctcaggagggccaacgg
tccagcagtagaaaaaggattctacagaggggccagtcagaggatgtgccctactccaac
aaacctcaggaatcagtggagatgaggcaggtggagaacggtgctgatatagggggctac
tctggtctggatggccatggcagagcagcctccatgccaagactggactcccagtacaat
cggacccaccctcgtcacagacctgggtcctacctggctcctattgctgacatcagtcct
attaggcggtcggcttccacattggcttcccagtgccaccgggagatgagtctgagagtc
tacaccctggagcggcccagccaagcccaggcctcctcagccccaggtcaagcccaggac
aggccccaccaccatcaccaccatcgctgtcacagacgcagggacaaggacagggacaag
aagcagaagtcacttgacagggcaaccagcgttcagccttctagtacagcatgttcgtct
gttgacccccctgtggagggcttgacccgggcgagggagtgtgaccgcggccggcctcat
gagaagaggcaccactctgcagccggggagacgaagcgttactactcctgtgagcgctac
gtaggcagggagcactgccacaccaagtcagctggccccagccgctccacctcccctgga
gagacccacgacctaggcctcttgaagcagagtatcaggatgagtaaaggcagccaagtg
gtcctaacctttggatctagcccatcctgccgtgggcgcagacagctcccccagaccccc
ctgaccccccgccccgccgtggcctacaagactggaaactccttgcccatgcagtttggt
tccacagggcaccagtcctttctcagtcgtggactctcggagcgtaacgccctgctggag
tcaccccccatacccgtcaccctcattggcttagacccaaacctgagcccctgtccgcgg
aaccccccaccatgcagactctctgaggagcctgacgacttccaggatgctgtgagcaac
catggagggagccactcccctaggatcattgcctcagcctcccatggggctgccgggccc
tcttctgcacctgccccacagggccgggttgggatcccaaacgggtaccacttcactctt
ggggtcaatgccgtttcaagctccagccccagagggactgggagcttccgggagaaggaa
gaggatgactggtgttag
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integrated database retrieval system
