Oncorhynchus mykiss (rainbow trout): 100136660
Help
Entry
100136660 CDS
T07259
Symbol
cdx1
Name
(RefSeq) caudal-type homeobox protein 1
KO
K09312
homeobox protein CDX1/4
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
omy03000
]
100136660 (cdx1)
Transcription factors [BR:
omy03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: HOXL
100136660 (cdx1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Caudal_act
Homeodomain
Homeobox_KN
MS_C
Motif
Other DBs
NCBI-GeneID:
100136660
NCBI-ProteinID:
NP_001118104
Ensembl:
ENSOMYG00000046060
UniProt:
Q6T5L3
LinkDB
All DBs
Position
31:30219930..30223418
Genome browser
AA seq
269 aa
AA seq
DB search
MWDPLDKEGSMYHPGPLRRSGINIPPQNFVSTPQYSDFTGYHHVPNMDTHTQSSGAWGAP
YVAPREDWGAYSLGPPNTIPTPMNNSSPGQVSYCSPEYNPMHAPGSAVLQPPTDNISVAQ
LSPDRERRNSSYQWMNKTVQSSSTGKTRTKEKYRVVYTDHQRLELEKEFHFNRYITIRRK
SELAGNLGLSERQVKIWFQNRRAKERKLIKKKMGSDGSGGSVHSDPGSVSPLPVPGSLSP
SDIHGSLYPPPGMNNLPSIRNIQQVTVTQ
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atgtgggatcctctggataaggagggcagcatgtatcacccaggacctttaagacgatcg
ggaatcaacatccccccacagaactttgtttccacgccacaatattccgactttactgga
taccatcatgtgccaaacatggatactcatacacagtcttcgggggcttggggagctcct
tatgtcgcaccgagggaggactggggcgcctatagtctggggcctcctaacactattcct
acgcccatgaacaactcctcgccgggacaagtttcatattgctcacctgaatacaatccc
atgcacgcgccagggtcagcagtattgcaaccacctacagataatatttctgttgctcaa
ctttccccggatagagaaaggcgcaattcttcttaccagtggatgaacaaaacggtacaa
tcatcatctacgggcaaaacaagaacgaaggagaaatacagagtggtttacaccgatcac
cagagactggagctggagaaggagtttcattttaatcgttacatcactatccgaagaaag
tccgaacttgcggggaacctgggcctttcagaacgacaggtgaagatctggtttcaaaat
cgcagagccaaggagaggaaattaatcaaaaagaaaatggggtctgatggcagtggagga
tcagtgcacagtgacccgggttcagtgagtcctctgcccgtaccaggctcactcagtccg
tcggatattcacggctctctctacccaccccccggaatgaacaacttgccatctattagg
aacatacagcaagttactgtcactcagtag
DBGET
integrated database retrieval system
