Oncorhynchus mykiss (rainbow trout): 100136759
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Entry
100136759 CDS
T07259
Symbol
arnt
Name
(RefSeq) aryl hydrocarbon receptor nuclear translocator
KO
K09097
aryl hydrocarbon receptor nuclear translocator
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
100136759 (arnt)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
omy03000
]
100136759 (arnt)
Transcription factors [BR:
omy03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
100136759 (arnt)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS
PAS_3
PAS_11
HLH
PAS_9
PAS_4
Per3-like_PAS-A
PAS_2
bHLH_NCOA
bHLH_INO2
Motif
Other DBs
NCBI-GeneID:
100136759
NCBI-ProteinID:
NP_001118182
Ensembl:
ENSOMYG00000004218
UniProt:
P79832
LinkDB
All DBs
Position
2:complement(17667882..17681708)
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AA seq
723 aa
AA seq
DB search
MDSSIPDIPDDSLGLGAGGAQASSSACCAKRVNKRRAAPDFDDDDDGSKLFRCDDDGGGG
DKERFARENHSEIERRRRNKMTAYITELSDMVPTCSALARKPDKLTILRMAVSHMKSLRG
SGNTAADGTYKPSFLTDQELKHLILEAADGFLFVVSCESGRVVYVSDSLTPVLNQSQSDW
LGSSLYDQLHPDDGDKLREQLSTAESNNTGRMLDLKTGTVKKEGQQSSVRMCMGARRSFI
CRMRCGSCPVEPMSMNRLNFLRSRNRNGLGPPKDGEPQYVVVHCTGYIKSWPPTGVNLTD
EEADNILGSRYCLVAIGRLQVTSCPSDTDMNSISVPVEFISRHNCQGLFTFVDHRCMATV
GYQPQELLGKNILELAHPEDQELLRDSFQQVVKLKGQVLSVMFRFLSKTRDWLWIRTSSF
TFQNPFSEEIEYIICTNANVKQLQQQQAELGGGGRDGLYEAGQVTLPQMPVQAVTAAGTD
HSKTMDKAEMHPSMYPNPDQAKFLPSTSAPGVPIYPQDNNNYTTANRSNDTYSRSVGMAP
QMVQPSHSAGQVLAQMSRQNGAPPSNSSPLQGGAAVSWPGPAAGARPPFNNQQVVPQAGK
ALSPQFAMGSFVGGSSSSFGAMPTTAAPTPTMGANYPNINPRATLNTNGYDGLGSGQQFP
SRAVEAVWPQWQGQQQAQNRAEQHPHTQNNQPDIFPDVLAMLDQPANFNNDDFEIPIYPS
FNE
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atggactcttctatcccagacataccagatgactctctgggtttgggagccggtggggcc
caggcaagcagcagtgcgtgttgtgccaaaagggtcaataagagacgagctgcgccagac
ttcgatgatgatgatgatggaagcaagctcttcaggtgtgatgacgatggaggaggagga
gacaaagagcgatttgccagggagaaccacagtgagattgagcggcggcggaggaacaag
atgactgcttacatcacagagctgtcagacatggttcccacctgcagcgcgttggcacgg
aaaccagataagctgaccatcctgcgcatggccgtgtcccacatgaagtctctgagaggg
agcggcaacactgcagcagacgggacatacaaaccatccttcctcaccgaccaggagctg
aagcacctgatcctggaagctgctgatggcttcctgtttgtggtgtcgtgtgagagtgga
cgggtcgtctacgtgtcagactccctgacccctgttcttaaccaatcacagtctgactgg
ctaggctcctcactctacgaccagctccacccggacgacggagacaaactacgagagcag
ctctctactgcagagagtaacaatacagggaggatgttagacctgaagacaggaacagtt
aagaaggagggacagcagtcctccgtcaggatgtgtatgggagccagacgatccttcata
tgtaggatgagatgtggttcgtgtccagtggagcccatgtctatgaacagattgaatttc
ctgcggagcaggaacaggaatggtctgggcccacccaaggatggagagcctcagtatgtg
gtggtccactgcactggatacatcaagtcctggccccccacaggggtgaatctaacagac
gaggaagcagacaatattctggggagtcgctactgtctagtcgccatcggtagacttcag
gtgacctcttgcccgagcgacacagacatgaacagcatcagcgttccggtggagttcatc
tctcgtcacaactgccagggcctctttaccttcgtagaccaccgctgcatggccacagtg
ggctaccagcctcaggaactgctgggtaagaacatcttggagctggcccaccctgaggac
caggaactgctgagagacagcttccagcaggtggtcaagctgaagggtcaggtgctgtcc
gtcatgttccgcttcctgtccaagaccagagactggctctggatcaggaccagctccttc
accttccagaaccccttctctgaggagatagagtacatcatctgtaccaacgccaatgtc
aaacagttgcagcagcagcaagcagagttggggggaggagggagagatggtctgtacgag
gcaggacaggttacacttccacagatgcctgtccaggccgtgaccgcagctggaactgac
cacagtaagaccatggacaaggcagagatgcacccctccatgtaccccaacccagaccag
gccaagttcctgccctccacctctgcccccggagtacccatctaccctcaggacaacaac
aactacaccactgccaaccgctccaacgacacatacagcaggtcagtagggatggcccct
cagatggtgcagccatcccactccgcaggccaggtgctggctcagatgtcccgtcagaac
ggggcacccccctccaacagcagccccctacagggaggggcagcggtgagctggccgggg
ccagcagcaggggctagaccccccttcaacaaccagcaggtggtgccccaggcagggaag
gccctgtctccccagtttgccatggggagttttgttgggggctcttcctcctcatttggg
gcgatgcccaccactgctgctccgacccccaccatgggggctaactacccaaatatcaac
ccccgcgccacgctcaataccaacggatatgatggcttggggtcggggcagcagttcccc
tccagggcagtggaggcagtgtggccccagtggcagggccagcagcaagctcagaacagg
gcagagcagcacccccacacacagaacaaccagcctgacatcttccctgatgttctcgcc
atgctggaccagccagccaacttcaacaacgatgactttgagattcccatctacccctct
ttcaacgagtga
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integrated database retrieval system
