Oncorhynchus mykiss (rainbow trout): 100136833
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Entry
100136833 CDS
T07259
Symbol
rag1
Name
(RefSeq) V(D)J recombination-activating protein 1
KO
K10628
V(D)J recombination-activating protein 1 [EC:
2.3.2.27
]
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04068
FoxO signaling pathway
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09130 Environmental Information Processing
09132 Signal transduction
04068 FoxO signaling pathway
100136833 (rag1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
omy04121
]
100136833 (rag1)
Enzymes [BR:
omy01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
100136833 (rag1)
Ubiquitin system [BR:
omy04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
100136833 (rag1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RAG1
RAG1_imp_bd
zf-C3HC4
zf-C3HC4_2
TRAF3_RING
zf-C3HC4_3
zf-RING_UBOX
zf-C3HC4_4
zf-RING_10
zf-RING_2
zf-RAG1
zf-RING_6
Motif
Other DBs
NCBI-GeneID:
100136833
NCBI-ProteinID:
NP_001118209
Ensembl:
ENSOMYG00000001899
UniProt:
Q91187
LinkDB
All DBs
Position
2:complement(80727903..80734996)
Genome browser
AA seq
1073 aa
AA seq
DB search
MEETYAPRCSMPAELHHPYSKFSDWKFKLFRVRSMERAPLPGEMQLERGALSGVVASAPL
GETVGDVVGLPGSVMKLWLGGKSKENVEGPGKRVDLKLQEMDTYMNHLRCLCRLCGGALR
KAKGPEHEVQGLLDEASMSALRRVGCKATSWPEVILKVFKVDVAGDMEVVHPPFFCQRCW
TLAMRGGGFCSFSRTHVPGWRPHTTLCLLCTPRNPHYRGERKRRKPTRGAQHLAKRTKWD
LQDNAAIVGEKRAWRTVIDPPQGPGLRPWVRSSVQRAQWVKSITLCQKEHLSARLLSEDL
PVDFLSSVTCQVCDHLLSEPVQSPCRHLFCRSCIAKYIYSLGPHCPACTLPCGPADLTAP
AKGFLGVLHSLPLLCPRESCGEQVRLDSFRAHCLGHHLEEVDGDHKSAENSLDNFLPVNK
GGRPRQHLLSLTRRAQKHRLRDLKTQVKVFAEKEEGGDTKSVCLTLFLLALRAGNEHRQA
DELEAMMQGRGFGLHPAVCLAIRVNTFLSCSQYHKMYRTVKATSGRQIFQPLHTLRTAEK
ELLPGYHPFEWQPALKSVSTSCHVGIIDGLSGWIASVDDSPADTVTRRFRYDVALVSALK
DLEEDIMEGLRERGLEDSACTSGFSVMIKESCDGMGDVSEKHGGGPPVPEKPVRFSFTIM
SVSIQAEGEDEAITIFREPKPNSEMSCKPLSLMFVDESDHETLTGVLGPVVAERNAMKHS
RLILSVGGLSRSFRFHFRGTGYDEKMVREMEGLEASGSTYICTLCDSTRAEASQNMTLHS
VTRSHDENLERYELWRTNPHSESAEELRDRVKGVSAKPFMETQPTLDALHCDIGNATEFY
KIFQDEIGEVYHKANPSREQRRSWRAALDKQLRKKMKLKPVMRMNGNYARKLMTREAVEA
VCELVCSEERQEALRELMGLYIQMKPVWRSTCPAKECPDELCRYSFNSQRFAELLSTVFK
YRYDGKITNYLHKTLAHVPEIVERDGSIGAWASEGNESGNKLFRRFRKMNARQSKTFELE
DVLKHHWLYTSKYLQKFMEAHKDSAKALQATIDTVGSQETQEDADMSLDVPDF
NT seq
3222 nt
NT seq
+upstream
nt +downstream
nt
atggaggagacatatgccccccggtgctccatgccggccgagctccatcatccctactcc
aagttctcagactggaagttcaagctgttccgggtcaggtccatggagagggccccactg
cccggggagatgcagctagagagaggggccttgtctggtgttgtggcctctgcacccctg
ggggaaactgtgggggatgtggtgggtctcccagggagtgtgatgaagctttggctgggg
ggtaagagcaaggagaacgtagagggcccgggaaagagagtggacctgaaactccaggag
atggacacatacatgaaccacctcaggtgtctgtgccgtctctgtggcggggccctgagg
aaagccaaaggtccagagcatgaagtccaggggcttctggacgaggctagcatgagtgcc
ctgcgtagggtgggctgcaaggccaccagctggccagaggtcatcctcaaggtcttcaaa
gtggacgtggcgggggacatggaggtcgtccatccaccattcttctgccagcgctgctgg
acattggccatgcgaggagggggcttctgcagcttctccaggacccatgtccctgggtgg
agaccccacaccaccctctgcctcctctgcaccccaagaaaccctcactacagaggagag
aggaagaggaggaagcctactcgtggagcccaacacctggccaagaggaccaagtgggac
ctccaggataatgctgctattgttggtgagaagagagcctggagaacagtgatagatcct
ccccagggacctggacttagaccctgggtgagatccagcgtccagagagctcagtgggtg
aagagcatcaccctctgccagaaagagcaccttagtgccagactgctgtccgaggacctc
cctgtggacttcctgagctcagtcacctgtcaggtgtgtgaccacctgttgtctgagccc
gtccagtccccctgcagacacctcttctgccgcagctgcatcgctaaatatatttactct
ctgggcccccactgcccggcttgcaccctgccctgcggccctgccgaccttactgcccca
gctaagggcttcctgggggtcctgcactccctgccgctgctttgccccagagagagctgt
ggggagcaggtacggctggactccttcagagcccactgtttgggtcaccatctggaggaa
gtggatggggaccacaagtcagcggaaaatagcctggacaacttcctgcctgtcaacaaa
gggggaaggccccgacagcatctcttgtcactgacgaggcgtgcccagaagcaccggctg
agggacctgaagacccaggtgaaggtgtttgcagagaaggaagaaggtggagacaccaag
tcggtgtgcctgaccctgttcctgctagctttgagggctggaaacgaacaccggcaggca
gacgaactggaggccatgatgcaaggcaggggctttggcctgcatcctgctgtgtgtctg
gccatccgggtcaacacattcctgagctgcagccagtaccacaagatgtaccgcaccgtc
aaggccaccagtgggcgtcagatcttccagcccctacacaccttacgcactgcagagaag
gagctcctcccaggctaccacccctttgagtggcagccggccctcaagagtgtgtccaca
tcctgccatgtggggatcattgatgggctatcagggtggatcgcttcggtagacgactcc
ccagcagatacagtcacgcgacggtttcgctacgacgtggccctggtgtcagccctgaag
gacctggaggaggacatcatggaggggctgagagagcgaggcctggaggacagtgcttgc
acctcgggcttcagcgttatgatcaaggagtcctgcgatggtatgggggacgtcagtgag
aagcatggcggagggccgcccgtcccggaaaagcctgtgcgtttctccttcaccatcatg
tccgtctctattcaagctgagggagaagatgaggcgatcaccattttccgggagcccaag
cccaactcagagatgtcctgcaagccgctaagcctgatgtttgtggacgagtcggaccac
gagactctcacaggcgtcctggggcctgtggtggccgaaaggaatgctatgaagcacagc
cgtctcatcctgtctgtgggcggcctttctcgctccttccgcttccacttccggggcacg
ggctatgatgagaagatggtgcgagagatggagggtttggaggcctctggctccacttac
atctgcacgctgtgtgactccactcgggcagaggcctcccaaaacatgactctccactct
gtcacccgcagccatgacgagaacctggagcgctacgaactttggaggaccaaccctcat
tctgagtcagctgaagagctgcgagaccgagtcaaaggcgtctctgccaagcccttcatg
gagacccagcccacactggacgccctgcactgtgatatcggcaatgccactgagttctac
aagatcttccaggatgagataggggaggtctatcacaaggcaaaccccagccgggagcag
cgtcggagctggcgggccgccctggacaagcagctgaggaagaagatgaagctgaagcct
gtgatgaggatgaatgggaactatgcacggaagctgatgacccgggaggcagtggaggca
gtgtgtgagctggtgtgctcagaggagcgtcaggaagctctgagggagctgatggggctc
tacatccagatgaagcctgtgtggcgctccacctgcccggccaaggagtgcccagacgag
ctctgccggtatagcttcaactcccaacgctttgcagagctgctctccaccgtcttcaag
tacaggtatgacggaaagatcaccaactacctgcacaagaccttggcccatgtgccagag
attgtggagagggatggctccatcggggcctgggccagcgaggggaatgagtctgggaac
aagctgttcagacggttcaggaagatgaatgcccgccagtccaagacctttgagctggag
gacgtgctgaagcaccactggctctacacatccaagtacctgcagaagttcatggaagct
cacaaggactctgccaaagctctgcaggccaccattgacactgtggggagtcaggagaca
caggaggatgctgacatgtcactggatgtcccagacttttga
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