Oncorhynchus mykiss (rainbow trout): 100170215
Help
Entry
100170215 CDS
T07259
Symbol
msh4
Name
(RefSeq) mutS protein homolog 4 isoform X1
KO
K08740
DNA mismatch repair protein MSH4
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
omy03036
]
100170215 (msh4)
Chromosome and associated proteins [BR:
omy03036
]
Eukaryotic type
Meiosis-specific proteins
Others
100170215 (msh4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_II
AAA_14
AAA_22
nSTAND3
AAA_23
ATPase_2
Motif
Other DBs
NCBI-GeneID:
100170215
NCBI-ProteinID:
XP_021440560
Ensembl:
ENSOMYG00000020471
LinkDB
All DBs
Position
25:complement(21134902..21141910)
Genome browser
AA seq
906 aa
AA seq
DB search
MLRSSTEELTPGNTTDSGRSSVLSPLDHRGGQSGPVSLGRGSTSAGLLTRVIHSFRGGRT
SSSVPPSSGSSFCGTPRLMGGTPRLGRTPGLAGALGIHPAWTPQTEPSVTTSCSSVTSTT
AASVIVAVVEGRGLARGEIGMASINLKCPELVLYQFADTGTYAKVITKLHILVPLEILMP
DTASEKGKGTKLYSLITENFQSVAFTAIQRKYFNERKGLEYIQQLSAPEYSTVIMEVQAK
YYCLAAAAALLKYFEFIQNSIYAPKSLKVSFKGSEHTAMIDSASATNLELVVNNRDHRSE
HTLLGVLNYTKTPGGGRRLRSNILEPLLDVDTINIRLDTIQELLQDEELFFGLKNAIGHF
LDIDQLLSVLVQIPKQETVQVAESKITHVIQLKHTLELVPPLRMVLKNCNTALLKAYSSS
LEDNRFDMILEQIKSVINDDTSYMKGSLNMRTQKCYAVRPNINEFLDIARRAYTEIVDDI
AGLVDQVGEKYGLPIRTSFSTARGFFIQMKLEGVALPDGELPADFIKVTKHKNNYSFTTA
DLMKMNDRCDEALREIFHMSYVVVCQLLNTVHEHIHCLYKLSDAVSMLDMLLSLANACTI
SDYVRPEFTDTLAIKQGRHPILERIVGQQPVSNNSYISEGSNFVIITGPNMSGKSTYLKQ
VALCQIMAQIGSFVPAEYASFRIADQIFTRIGVDDDFETNSSTFMVEMKEVSYLIHNVSD
RSLIIIDELGRGTSAEEGVGICHSVCEFLLSLRAFTLFATHFLELCELETLYPNVENQHM
EVQHTRTGDTGTERVIYTFLLSRGSSEERNYGLRAAAMTALPSTIIQEAKAISSKVSQQL
LAKHHSDPETQRQRAVYHLATRLLQTARNSRLDPDSLRIYLKGLKRHYEAELQVIGEPVS
METEEE
NT seq
2721 nt
NT seq
+upstream
nt +downstream
nt
atgcttcgaagtagtacagaggagttgacacctggcaacaccacggactccggaagaagc
tcggtgctgtcacctttggatcatcgaggcggacaaagtgggcctgtgtcactcggtcgt
ggatcaacatctgcagggctgctcacaagagtgattcacagcttcagagggggaaggaca
agttcatctgtcccaccatccagtggctcctcattctgtgggacccccagactcatgggg
gggacccccagacttgggaggaccccaggcttagctggggctctaggcatacaccctgca
tggacgccacagactgaaccctctgtgaccactagctgctcttctgtgacatcgaccact
gctgcctctgtgattgtggcggtggtagaagggcgtgggttggccaggggggagattggc
atggccagtatcaacctgaaatgcccagagctggtcctctatcagtttgcagacactggg
acctatgccaaggttatcaccaagcttcacatcctggtgccactcgagatactgatgcca
gacactgccagtgagaaaggcaaagggaccaagctatacagcctaatcacagaaaacttt
cagtcagtagctttcactgcaatccagagaaagtacttcaatgagagaaaagggctggaa
tacatccagcaactgtctgcaccagagtacagcactgttattatggaggtgcaagctaaa
tactattgcctggcagctgcggctgctttactgaaatactttgagttcattcagaactcc
atttatgcaccaaagtcactgaaagtaagcttcaaagggagtgagcatactgccatgatc
gactcagcgtctgccactaacctggagctggttgtcaacaacagggaccacaggagtgaa
cataccctgttaggggttctgaactacaccaaaacccctggtgggggaaggcggctgcgc
tctaacattctagagcccttgctggatgtcgataccataaacatacgtctagacaccatt
caagagctgttacaggatgaggagctcttctttggcttaaagaatgccattggacatttt
ctggatatagaccaactgctctctgttcttgtccagatccccaagcaggaaacggttcaa
gttgcagagtcaaagattacacatgtgattcagctgaagcatactctggagttggtacca
ccactgaggatggtgctgaagaactgtaacactgctctgctgaaggcttacagcagctca
ctggaagacaacaggtttgacatgatcttggagcagatcaagtcagtgattaatgatgac
accagctacatgaaggggagcctcaacatgcgcacacagaagtgctacgctgtgcgcccc
aacatcaacgagttcctggacattgcccggcgagcctacactgagattgtggatgacatt
gcagggctggttgaccaggtgggggagaagtatggcttgccgatacgcaccagcttcagc
acagctcgaggcttcttcatccagatgaaactggagggggtagctttacctgatggggaa
ctcccagctgacttcatcaaggtgacgaagcacaagaacaactacagcttcaccacagca
gacctgatgaagatgaatgatcgctgtgatgaggccctgagggaaatatttcacatgtcc
tatgtggtggtgtgtcagctgctgaatacagttcatgagcatatacactgtctttacaaa
ctgtccgatgctgtgtccatgctagacatgctgctgtcactagccaatgcatgcaccatc
tcagactatgtacgtcctgagttcacagacacactggccatcaagcagggtcgtcacccc
attctggagcgcatcgttggccagcagcccgtgtccaacaacagctacatctctgagggc
agcaactttgtaatcatcactgggcccaacatgagcggcaagtccacctacctcaaacag
gtggcgctgtgccagatcatggctcagataggctcctttgtccctgccgagtatgcctcc
ttccgcattgctgaccagattttcaccagaatcggggtggatgacgactttgagaccaac
tcctcaacctttatggtggaaatgaaggaggtctcatatttaatccataatgtgagtgat
aggtctctcattatcatagacgagcttgggcgtggtactagtgctgaggagggtgtcggc
atctgtcactctgtctgcgaattcctccttagcctcagggcgttcacgctgttcgccaca
cacttcctggaactatgtgagctggagacattgtaccccaatgtggaaaaccagcacatg
gaggttcagcacacccgcactggtgatacgggtacagagcgtgtcatctataccttcctg
ctgagccgtggaagctctgaggaaagaaactacggtctgagggctgcggcgatgactgca
ctgccttcaaccataatccaagaagcaaaggcgattagctctaaagtcagccaacagctc
ttggccaagcaccacagtgatccggaaacgcaacggcagagagcagtgtaccacctggcc
actcggctcctgcagacagccaggaactccaggctggaccctgacagcctacgcatctat
ctgaagggcctgaagagacactatgaagcagagctgcaggtcataggagagcctgtgtcc
atggagacagaggaagaatga
DBGET
integrated database retrieval system
