KEGG   Oncorhynchus mykiss (rainbow trout): 100301676
Entry
100301676         CDS       T07259                                 
Symbol
ifn2
Name
(RefSeq) type I interferon 2 precursor
  KO
K05414  interferon alpha
Organism
omy  Oncorhynchus mykiss (rainbow trout)
Pathway
omy04060  Cytokine-cytokine receptor interaction
omy04217  Necroptosis
omy04620  Toll-like receptor signaling pathway
omy04621  NOD-like receptor signaling pathway
omy04622  RIG-I-like receptor signaling pathway
omy04623  Cytosolic DNA-sensing pathway
omy05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:omy00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04060 Cytokine-cytokine receptor interaction
    100301676 (ifn2)
 09140 Cellular Processes
  09143 Cell growth and death
   04217 Necroptosis
    100301676 (ifn2)
 09150 Organismal Systems
  09151 Immune system
   04620 Toll-like receptor signaling pathway
    100301676 (ifn2)
   04621 NOD-like receptor signaling pathway
    100301676 (ifn2)
   04622 RIG-I-like receptor signaling pathway
    100301676 (ifn2)
   04623 Cytosolic DNA-sensing pathway
    100301676 (ifn2)
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    100301676 (ifn2)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04052 Cytokines and neuropeptides [BR:omy04052]
    100301676 (ifn2)
Cytokines and neuropeptides [BR:omy04052]
 Cytokines
  Interferons
   100301676 (ifn2)
SSDB
Motif
Pfam: Interferon Exo84_C
Other DBs
NCBI-GeneID: 100301676
NCBI-ProteinID: NP_001153977
Ensembl: ENSOMYG00000041047
UniProt: Q70G08
LinkDB
Position
13:32714937..32722676
AA seq 179 aa
MCTMQSWTCLFLILCSMQSVCHCCDWIQHHFGHLSAEYLSQLEQMGGDITKQNAPVLFPT
SLYRHIYDAEFEDKVRFLNETIYQIIKLFDGNRNRNRKSVTWDKKNLDDFLNILDRQFEN
LSSCVSPVVKPEKRLKRYFRNLNRKVLRKMNYSAEAWELIRKETKRHLQRLDILVGQMY
NT seq 540 nt   +upstreamnt  +downstreamnt
atgtgtacaatgcagagttggacgtgtctttttcttattctttgcagtatgcagagtgtg
tgtcattgctgtgactggatccaacaccacttcggtcacttaagcgcagaatacctttcc
cagctggagcagatgggaggagatatcacaaagcagaatgcccctgtccttttcccaaca
tcactttacagacacatatatgatgccgagtttgaggacaaagtcagattcctgaacgag
accatctatcaaatcataaaactgtttgatgggaataggaataggaataggaagtcagtc
acctgggacaagaaaaacctggacgatttcctcaacattctcgatcgccaatttgagaac
cttagttcctgtgtatcacctgtcgtgaaacctgagaagagactgaaacggtacttcagg
aatttgaatagaaaagttctgagaaaaatgaactacagtgcagaggcgtgggagctcatc
aggaaagagacaaaacgtcatctgcaaagattggatatccttgtgggacagatgtactga

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