Oncorhynchus mykiss (rainbow trout): 100301746
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Entry
100301746 CDS
T07259
Symbol
polr2j
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB11-a
KO
K03008
DNA-directed RNA polymerase II subunit RPB11
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy03020
RNA polymerase
omy03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
100301746 (polr2j)
09124 Replication and repair
03420 Nucleotide excision repair
100301746 (polr2j)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
omy03021
]
100301746 (polr2j)
03400 DNA repair and recombination proteins [BR:
omy03400
]
100301746 (polr2j)
Transcription machinery [BR:
omy03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
100301746 (polr2j)
DNA repair and recombination proteins [BR:
omy03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
100301746 (polr2j)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_L_2
RNA_pol_L
Motif
Other DBs
NCBI-GeneID:
100301746
NCBI-ProteinID:
NP_001154047
Ensembl:
ENSOMYG00000041882
UniProt:
C1BF62
LinkDB
All DBs
Position
12:complement(37936226..37938429)
Genome browser
AA seq
117 aa
AA seq
DB search
MNAPPAFESFLLFEGEKKITIIKDTKVPNACLFTLNKEDHTLGNIIKQQLLKDPQVLFAG
YKVPHPLEHKTVIRVQTTPDYSPQEAFTNVITDLISELSLLEERFRVAIKDKQEGIE
NT seq
354 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcgccaccggcattcgagtcatttctgttgtttgaaggggaaaagaaaatcaca
atcatcaaggacacaaaagtccctaacgcctgcctcttcacgttgaacaaagaggatcac
acgcttggtaacatcatcaaacaacaacttctgaaagacccccaagtgctatttgctggc
tacaaggtccctcatcctctggagcacaagactgtgatccgtgttcagaccactccagac
tacagtcctcaggaggctttcactaatgtaatcactgacctcatcagtgagctgtccttg
ttggaggagcgattcagggttgcgattaaagacaagcaagaaggaattgaatga
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