KEGG   Oncorhynchus mykiss (rainbow trout): 100305166
Entry
100305166         CDS       T07259                                 
Symbol
chm2a
Name
(RefSeq) charged multivesicular body protein 2a
  KO
K12191  charged multivesicular body protein 2A
Organism
omy  Oncorhynchus mykiss (rainbow trout)
Pathway
omy04144  Endocytosis
omy04217  Necroptosis
Brite
KEGG Orthology (KO) [BR:omy00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    100305166 (chm2a)
  09143 Cell growth and death
   04217 Necroptosis
    100305166 (chm2a)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:omy04131]
    100305166 (chm2a)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:omy04147]
    100305166 (chm2a)
Membrane trafficking [BR:omy04131]
 Endosome - Lysosome transport
  Endosomal sorting complexes required for transport (ESCRT)
   ESCRT-III complex
    100305166 (chm2a)
Exosome [BR:omy04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   100305166 (chm2a)
  Exosomal proteins of other body fluids (saliva and urine)
   100305166 (chm2a)
  Exosomal proteins of colorectal cancer cells
   100305166 (chm2a)
SSDB
Motif
Pfam: Snf7
Other DBs
NCBI-GeneID: 100305166
NCBI-ProteinID: NP_001158542
Ensembl: ENSOMYG00000043771
UniProt: C1BGQ5
LinkDB
Position
16:complement(18622633..18626440)
AA seq 220 aa
MEFLFGKRKTPEEMLRQNQRALTRAMRDLDRERQRLEQQEKKIIADIKKMAKQGQMDAVK
IMAKDLVRTRHYVKKFIMMKANIQAVSLKIQTLKSNNSMAQAMKGVTKAMATMNRQMKLP
QIQKIMMEFERQSEIMDMKEEMMNDAIDDAMGDEDDEEESDAVVSQVLDELGLNLSDELP
NLPSTGGSLSVAGGKKAEPQPALADADADLEERLNNLRRD
NT seq 663 nt   +upstreamnt  +downstreamnt
atggagttcttgtttgggaagaggaagaccccggaggagatgttgaggcaaaaccagagg
gcactgactcgggccatgagagatctggacagagagcgacaaagactggagcagcaggag
aagaaaatcatagctgacattaagaaaatggccaaacagggacagatggatgctgtgaag
atcatggcgaaggacttggttcgtacaaggcactatgtgaagaaattcattatgatgaag
gcaaatatccaagcagtcagcctgaagatccagactctaaagtcaaacaacagcatggca
caagcaatgaaaggtgtcaccaaagcaatggctaccatgaacagacagatgaagttgcca
cagattcagaagatcatgatggagtttgaacgacagagtgagatcatggacatgaaggag
gagatgatgaatgatgccatagacgatgccatgggtgatgaggatgatgaagaagagagt
gatgctgttgtgtcccaagtgttggatgagctgggtctcaatctctctgacgaactccca
aatctgccatccacgggtggtagcctctccgtagcaggtgggaagaaagctgaaccccag
ccagccctggcagatgcagatgctgaccttgaggagagactgaataaccttaggagagac
tga

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