Oncorhynchus mykiss (rainbow trout): 100305168
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Entry
100305168 CDS
T07259
Name
(RefSeq) RNA-binding protein 8A
KO
K12876
RNA-binding protein 8A
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy03013
Nucleocytoplasmic transport
omy03015
mRNA surveillance pathway
omy03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100305168
09122 Translation
03013 Nucleocytoplasmic transport
100305168
03015 mRNA surveillance pathway
100305168
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
omy03019
]
100305168
03041 Spliceosome [BR:
omy03041
]
100305168
Messenger RNA biogenesis [BR:
omy03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
100305168
Spliceosome [BR:
omy03041
]
Complex C
Other components
EJC/TREX
100305168
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_5
Motif
Other DBs
NCBI-GeneID:
100305168
NCBI-ProteinID:
NP_001158544
Ensembl:
ENSOMYG00000004925
UniProt:
C1BGS0
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All DBs
Position
3:complement(24808425..24815467)
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AA seq
182 aa
AA seq
DB search
MADVLDLHEAGGEDFAMDEDGDDSIHKLKEKAKRRKGRGFGSEEGARSRVREDYDTVEQD
GDEPGPQRSVEGWILFVTGVHEEATEEDIHDKFAEFGEIKNLHLNLDRRTGYLKGYALVE
YETYKEAQAAMEGLNGQDMMGQPISVDWGFVRGPTQEQEEGWWTETQQESRQETTLIPHI
CS
NT seq
549 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgtactagatcttcatgaagcgggaggcgaggactttgctatggatgaggat
ggtgatgacagcatccacaagttaaaagaaaaggcaaagaggagaaagggacgaggtttt
ggttcagaggagggagcgaggtccagagtgagagaggactatgatacagtggagcaggat
ggagacgagccaggtcctcagagatctgtggagggttggatccttttcgtgactggggta
catgaagaggcaactgaggaggacatccacgacaagtttgcagagtttggagagatcaag
aacttacatctgaacctggaccgaagaacaggttacctcaagggttatgcgctggtggag
tatgagacatacaaagaagcccaggcagccatggaagggttgaatggtcaggacatgatg
ggccagcctatcagtgtggactggggctttgtcaggggacccacccaagagcaagaggag
gggtggtggacggagacgcagcaggagtccagacaggagacgacgttgattccccacatc
tgctcttga
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