KEGG   Oncorhynchus mykiss (rainbow trout): 100305168
Entry
100305168         CDS       T07259                                 
Name
(RefSeq) RNA-binding protein 8A
  KO
K12876  RNA-binding protein 8A
Organism
omy  Oncorhynchus mykiss (rainbow trout)
Pathway
omy03013  Nucleocytoplasmic transport
omy03015  mRNA surveillance pathway
omy03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:omy00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    100305168
  09122 Translation
   03013 Nucleocytoplasmic transport
    100305168
   03015 mRNA surveillance pathway
    100305168
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:omy03019]
    100305168
   03041 Spliceosome [BR:omy03041]
    100305168
Messenger RNA biogenesis [BR:omy03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     100305168
Spliceosome [BR:omy03041]
 Complex C
  Other components
   EJC/TREX
    100305168
SSDB
Motif
Pfam: RRM_1 RRM_3 RRM_5
Other DBs
NCBI-GeneID: 100305168
NCBI-ProteinID: NP_001158544
Ensembl: ENSOMYG00000004925
UniProt: C1BGS0
LinkDB
Position
3:complement(24808425..24815467)
AA seq 182 aa
MADVLDLHEAGGEDFAMDEDGDDSIHKLKEKAKRRKGRGFGSEEGARSRVREDYDTVEQD
GDEPGPQRSVEGWILFVTGVHEEATEEDIHDKFAEFGEIKNLHLNLDRRTGYLKGYALVE
YETYKEAQAAMEGLNGQDMMGQPISVDWGFVRGPTQEQEEGWWTETQQESRQETTLIPHI
CS
NT seq 549 nt   +upstreamnt  +downstreamnt
atggcggacgtactagatcttcatgaagcgggaggcgaggactttgctatggatgaggat
ggtgatgacagcatccacaagttaaaagaaaaggcaaagaggagaaagggacgaggtttt
ggttcagaggagggagcgaggtccagagtgagagaggactatgatacagtggagcaggat
ggagacgagccaggtcctcagagatctgtggagggttggatccttttcgtgactggggta
catgaagaggcaactgaggaggacatccacgacaagtttgcagagtttggagagatcaag
aacttacatctgaacctggaccgaagaacaggttacctcaagggttatgcgctggtggag
tatgagacatacaaagaagcccaggcagccatggaagggttgaatggtcaggacatgatg
ggccagcctatcagtgtggactggggctttgtcaggggacccacccaagagcaagaggag
gggtggtggacggagacgcagcaggagtccagacaggagacgacgttgattccccacatc
tgctcttga

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