KEGG   Oncorhynchus mykiss (rainbow trout): 100305189
Entry
100305189         CDS       T07259                                 
Symbol
taf10
Name
(RefSeq) transcription initiation factor TFIID subunit 10
  KO
K03134  transcription initiation factor TFIID subunit 10
Organism
omy  Oncorhynchus mykiss (rainbow trout)
Pathway
omy03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:omy00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    100305189 (taf10)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:omy03021]
    100305189 (taf10)
   03036 Chromosome and associated proteins [BR:omy03036]
    100305189 (taf10)
Transcription machinery [BR:omy03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     100305189 (taf10)
   Coactivators
    SAGA/TFTC/STAGA complex
     100305189 (taf10)
Chromosome and associated proteins [BR:omy03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     100305189 (taf10)
    STAGA complex
     100305189 (taf10)
    TFTC complex
     100305189 (taf10)
    SAGA complex
     100305189 (taf10)
    SLIK complex
     100305189 (taf10)
SSDB
Motif
Pfam: TAF10 Bromo_TP
Other DBs
NCBI-GeneID: 100305189
NCBI-ProteinID: NP_001158565
Ensembl: ENSOMYG00000020995
UniProt: C1BGY2
LinkDB
Position
9:43285841..43287979
AA seq 187 aa
MNVDTPQPVIPGGSSSISSTSSNCITNNNAATNVSSIPSVAISNAPTSATMATPSSDTSV
SNGVYVPSGIANGDVKPVISTTPLADFLMQLEDYTPTIPDAVTGYYLNRAGFEASDPRII
RLVSLAAQKFISDIANDALQHCKMKGTASGSSRNKTKQDKKYTLTMEDLSPALSEYGINV
KKPHYFA
NT seq 564 nt   +upstreamnt  +downstreamnt
atgaacgttgatactccacagccagtcataccagggggctcttcttcaatttcctcgaca
tccagtaattgcatcactaacaacaatgcagcaactaatgtcagcagtatcccctcggtt
gccataagtaatgccccaacctcggctaccatggccacaccatcatctgacacatccgtg
tccaacggtgtctatgttcccagtggcattgccaacggcgatgtgaagcctgtaatctcc
accacaccactggctgactttctcatgcaattggaggactacactcctacaatccctgat
gcagtgacaggctactatctgaaccgggccggctttgaggcgtctgatccgcgaataatc
cgtttggtctccctagcagctcagaaattcatctcagacattgctaacgatgccctgcag
cattgtaaaatgaagggcacagcctctgggagctccaggaacaagacaaagcaggacaag
aagtacacattgaccatggaggacctctcccctgccctgtctgagtatggcatcaatgta
aagaaaccgcattacttcgcatag

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