Oncorhynchus mykiss (rainbow trout): 100305259
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Entry
100305259 CDS
T07259
Symbol
chmp5b
Name
(RefSeq) charged multivesicular body protein 5
KO
K12198
charged multivesicular body protein 5
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04144
Endocytosis
omy04217
Necroptosis
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
100305259 (chmp5b)
09143 Cell growth and death
04217 Necroptosis
100305259 (chmp5b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
omy04131
]
100305259 (chmp5b)
Membrane trafficking [BR:
omy04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-III complex
100305259 (chmp5b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Snf7
Histone_HNS_N
Prefoldin_2
Alpha-E
Big_3_3
RUBC_PIKBD
Hydantoinase_B
DUF948
NPV_P10
DUF8221
Motif
Other DBs
NCBI-GeneID:
100305259
NCBI-ProteinID:
NP_001158636
Ensembl:
ENSOMYG00000021092
UniProt:
C1BHT1
LinkDB
All DBs
Position
15:28222578..28227687
Genome browser
AA seq
220 aa
AA seq
DB search
MNRIFGRGKPKGPPPNLTDCIGNVDSRAESVDKKIARLDVELVKYKDQMKKMRDGPSKNM
VKQKAMRVLKQKRMYEGQRDNLTQQSFNMEQANYTIQTLKDTKTTVDAMKIGAKEMKAAY
KNVKIDQIEDLQDQLEDVMEDANEVQEAMSRSYGTPEIDDDDLEAELDALGDELLLDDDS
SYLDEASTAPSIPEGIPSDGATNRDGVLVDEFGLPQIPAT
NT seq
663 nt
NT seq
+upstream
nt +downstream
nt
atgaaccgtatttttggtcgaggaaaaccgaagggaccaccaccaaatctaacggactgt
ataggaaatgttgactcacgagcggagtctgttgacaagaagattgccagactagatgtt
gaactggtcaagtacaaggatcagatgaagaagatgagagacggtccttcaaagaacatg
gtcaagcagaaggcaatgagagtgctgaagcagaagagaatgtatgagggccagagagat
aacctcacacagcagtccttcaacatggaacaggccaactacacaatacaaactctcaaa
gacacaaaaacaacagtggatgctatgaaaattggagccaaagagatgaaggcggcatac
aagaatgtgaagatcgatcagattgaggatctccaggaccagctggaggacgtgatggag
gacgccaacgaggtgcaggaggcgatgagcagaagctacgggacgccagagatcgatgac
gatgacctggaagcagagctggatgccctgggagatgagctgctgctagatgatgacagc
tcctacctggatgaggccagcactgccccctccatcccagaaggaatacccagtgacggg
gcaacaaaccgggatggagttctggtggatgaatttggactaccacagatccctgccaca
taa
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