Oncorhynchus mykiss (rainbow trout): 100305324
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Entry
100305324 CDS
T07259
Symbol
rpb7
Name
(RefSeq) DNA-directed RNA polymerase II 19 kDa polypeptide
KO
K03015
DNA-directed RNA polymerase II subunit RPB7
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy03020
RNA polymerase
omy03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
100305324 (rpb7)
09124 Replication and repair
03420 Nucleotide excision repair
100305324 (rpb7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
omy03021
]
100305324 (rpb7)
03019 Messenger RNA biogenesis [BR:
omy03019
]
100305324 (rpb7)
03400 DNA repair and recombination proteins [BR:
omy03400
]
100305324 (rpb7)
Transcription machinery [BR:
omy03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Pol II specific subunits
100305324 (rpb7)
Messenger RNA biogenesis [BR:
omy03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
100305324 (rpb7)
DNA repair and recombination proteins [BR:
omy03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
100305324 (rpb7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
SHS2_Rpb7-N
Motif
Other DBs
NCBI-GeneID:
100305324
NCBI-ProteinID:
NP_001158701
Ensembl:
ENSOMYG00000037692
UniProt:
C1BIG7
LinkDB
All DBs
Position
14:complement(37803588..37810500)
Genome browser
AA seq
172 aa
AA seq
DB search
MFYHISLEHEILLHPRYFGPNLLNTVKQKLFTEVEGTCTGKYGFVIAVTTIDNIGAGVIQ
PGRGFVLYPVKYKAIVFRPFKGEVVDAVVTQVNKVGLFTEIGPMSCFISRHSIPSEMEFD
PNSNPPCYKTTDEDIVIQQDDEIRLKIVGTRVDKNDIFAIGSLMDDYLGLVS
NT seq
519 nt
NT seq
+upstream
nt +downstream
nt
atgttttatcatatttccctggagcatgagatcctgctccaccctcggtactttggtccc
aatctcctgaacactgtgaaacaaaagctcttcacagaagtggagggaacatgcacagga
aaatatggattcgtcattgcggtgaccaccattgacaacattggtgcaggtgtcatccaa
ccaggcaggggatttgtgctttaccctgtcaagtacaaggctattgtcttccgtccattc
aaaggcgaggtggtagatgccgtggttacccaggtcaacaaagttggactgttcacagag
atcggccccatgtcctgtttcatctctcgtcactccattccctcagagatggagtttgac
cccaactcgaatcctccctgttataagaccactgatgaggacattgtaatccaacaggat
gatgagattcggttaaagatcgtgggaacaagagtggataaaaacgacattttcgctatt
ggatccctcatggacgattacctgggtcttgtcagctga
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integrated database retrieval system
