Oncorhynchus mykiss (rainbow trout): 100462673
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Entry
100462673 CDS
T07259
Symbol
trpc1
Name
(RefSeq) short transient receptor potential channel 1
KO
K04964
transient receptor potential cation channel subfamily C member 1
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
omy04040
]
100462673 (trpc1)
Ion channels [BR:
omy04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
100462673 (trpc1)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
TRP_2
Ion_trans
Ank_2
Ank_4
MTR4-like_stalk
LHD_TRPY1
TALPID3
Motif
Other DBs
NCBI-GeneID:
100462673
NCBI-ProteinID:
NP_001171982
Ensembl:
ENSOMYG00000011536
UniProt:
D7NVX6
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All DBs
Position
11:21069765..21117062
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AA seq
779 aa
AA seq
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MAALYQVTDVSSPDKFLALKDVREVKEETTLDEKLFLLACEKGDYYMVKRLLEEKTELNI
NCVDVLGRDAVTISIENQNLDILKLLLEHGCQATDALLVAIDSEVVGAVDILLNHHPRRS
SKPSIAKLMQRIQNPEYSTTMDVAPVILAAHRNNYEILTMLLKQDISLPRPHAVGCECTL
CNAKNKKDSLRHSRSRLDIYRCLASPSLIMLTEEDPILRAFELSADLRELSPVEVEFRND
YEELAKQCKMFAKDLLAQARNSRELEVILNHMANEDTVDKRGLMEERMNLSRLKLAIKYN
QKEFVAQSNCQQFLNTVWFGETASYWRKHTCLKMSTVLSVAVLWPLLSYLVVPRSRVGHI
IHTPFVKFIIHSASYYTFLLLINLYSLVYNEGKKNTMGPALEMIDYLLILWIIGMVWSDV
KRLWYEGLEDFLDESRNQLSFVMNSLYLSTFALKIVAHSKFKNVEDTEGKNWDAFHPILV
AEGLFAFANVLSYLRLFFMYTTSSILGPLQISVGQMLQEFGKFLGLFLLVLISFTIGLTQ
LYGKDQKDPAKSPAKDCEGIFCQQQSNDAFHTFMGTCYALFWYIFSLAHVALFVTRINYT
EELRSFVGALIVGTYNIVVVIVLTKLLVAMLHKSFRQIANHEDKEWKFARAKLWLSYFDD
KCTLPPPFNILPSPKTVCYLLTSMSKWICSHTSTGKVKRQNSLKEWRNLKRKRDENYQKI
MCCLVHRYLTSTRQKMQSTDQATVENLNDLRQDLSKFRNEMRDLLGFRTSKYAMFYPRS
NT seq
2340 nt
NT seq
+upstream
nt +downstream
nt
atggccgctctatatcaggtcacggacgtgtcctctccggataaatttctggccctgaaa
gacgtgagggaggtgaaggaggagactactctggatgaaaagctcttcctactggcctgt
gagaaaggtgactactacatggtgaagagactgctggaggagaagacagagctcaatatc
aactgtgtagatgtgctggggagagacgctgtcaccatctctatagagaaccaaaacctg
gacatccttaagcttctgctggagcacggctgccaggcaacagatgctctgttagtggcc
attgactcggaggtggtgggagctgtggacatcctcctcaaccatcaccccaggaggtcc
tctaagccctccatcgctaaactgatgcagcgcatccagaaccccgagtactccaccacc
atggacgtggctccagtgatcctggcggcccataggaacaactatgagatactgaccatg
ttgctgaagcaggatatctccctgcccaggcctcacgctgtgggctgcgagtgtactctc
tgtaatgccaagaacaagaaggacagcctacggcactccaggtctcgtctggacatctac
aggtgcctggccagcccgtctttgattatgctgaccgaggaggaccccatcctcagggcc
tttgagctgagtgcagacctcagggagctcagcccggttgaggtggagttcaggaatgac
tatgaggagctggctaagcagtgtaagatgtttgctaaggatctcctggcccaggcacgt
aactccagagaactggaggtgatcctcaaccacatggccaatgaagacacagtggacaag
agaggcctgatggaggaacgcatgaacctcagccgactcaaactagctatcaagtacaac
cagaaagagtttgtggcccagtccaactgccagcagttcctcaacaccgtctggttcggc
gagacggccagctactggcgtaaacacacgtgtctgaagatgtccacggtactgagcgtg
gcggtgctgtggccgctgctctcctacctagtggtgccgcgctcccgcgtgggccatatc
atccacacgcccttcgtcaagttcatcatacacagtgcctcctactacaccttcctcttg
ctcatcaacctgtactctctggtgtacaacgagggcaagaagaacaccatgggccctgcc
ctggagatgatcgactacctgctcatactctggatcatagggatggtgtggtcggacgtg
aagcgtctatggtacgagggcttggaggacttcctggatgagtcgaggaatcagctgagc
ttcgtcatgaactctctctacctgtccaccttcgccctcaagatagtggctcacagcaag
tttaagaacgtggaggacacagaggggaaaaattgggatgccttccaccccatccttgtg
gctgaggggctgtttgccttcgctaacgtcctgagctacctacgactgttcttcatgtac
accaccagctcaatactgggcccactgcagatctccgttggccagatgctgcaggagttt
ggtaagttcctgggtctgtttctgctggtgctcatctctttcaccatcggcctgacgcag
ctctacgggaaggatcagaaggacccggccaagagtcccgccaaagactgtgagggcatc
ttctgtcagcagcagagcaacgacgccttccacacgttcatgggaacgtgctacgcactg
ttctggtacatcttctctctggcccacgtggctctcttcgtgacccggatcaactacacg
gaggagctgaggtcatttgtgggagccctcatcgtgggcacgtacaacatcgtggtggtc
atcgttctcaccaagctgctggtcgccatgctccacaagagcttcaggcagatcgctaac
cacgaggataaggagtggaagtttgcccgcgccaagctgtggctgagctactttgacgac
aagtgtactctgccgccgcccttcaacatcctaccctcccccaagactgtgtgttacctt
ctgaccagtatgagtaaatggatctgctcccacacctccacggggaaggtcaagagacag
aacagcctcaaggagtggaggaacctgaagcggaagcgtgatgagaactaccagaagatc
atgtgttgtcttgtccaccgctacctgacctccacgcggcagaagatgcagagcaccgac
caggccaccgtagagaacctcaacgacctgcggcaggacctctccaagttccgcaacgag
atgagggacctgctgggattcagaacctccaagtacgccatgttctacccccggagctaa
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