Oncorhynchus mykiss (rainbow trout): 100462762
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Entry
100462762 CDS
T07259
Symbol
ppargc1a
Name
(RefSeq) peroxisome proliferator-activated receptor gamma coactivator 1-alpha isoform X1
KO
K07202
alpha peroxisome proliferator-activated receptor gamma coactivator 1-alpha
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04371
Apelin signaling pathway
omy04910
Insulin signaling pathway
omy04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
100462762 (ppargc1a)
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
100462762 (ppargc1a)
04920 Adipocytokine signaling pathway
100462762 (ppargc1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
omy03029
]
100462762 (ppargc1a)
Mitochondrial biogenesis [BR:
omy03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Coactivators
100462762 (ppargc1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Motif
Other DBs
NCBI-GeneID:
100462762
NCBI-ProteinID:
XP_036843493
LinkDB
All DBs
Position
9:complement(23265274..23308754)
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AA seq
1273 aa
AA seq
DB search
MAWDRCNQDSVWRELECAALVGEDQPLCPDLPELDLSELDVSDLDADSFLGGLKWYSDQS
EIISSQYGNEASNLFEKIDEENEANLLAVLTETLDSIPVDEDGLPSFEALADGDVTNASD
QSCPCTPDGSPRTPEPEEPSLLKKLLLAPANSQLSYNQYIGDKAQNHAASNHRIRPTPAV
VKTEISWNSKPRGGCPQQSRLVRRPCTELLKYLTATDDILLQTKASDAKSAWGGGGKDKG
GLLGASSSTSSSPSSSSTSSFSSLSSSSSIASKKKSSSSSVVSQQQQQQHHQRGESRAAG
ECSVAGVGAGKWRRCAHGAGGTEGQSEPAAAPAPVPPTRRNGSGHARPKLERRPSSEEGR
PPGPQPAVDAGRLAAARFIRYMHSYSLLPRETGQTGSCGRCPEVGTATQASECWGGHGRG
AAARRHITVTIKKREEEPGHPLLSQLLTSKQRPASYRAHLLLPATTPQPRKSSSSRMSSG
VLERDQCPSQAIEVEEKYRGTVNINPGSWGLRQAKEPDSDPLLAESLGLGSWVSQSDQGL
DLGLELGLGWPEVGLVEQAGCFGEEVRDDDAMGSPMALSQGLPCPLFPDSRIPDPTPSFT
QGQQHLHMQAVCGHPDDQGLLLLAKPTTLPLPLTPESPNDHKGSPFESKSIERTLSVEIS
GTPGLTPPTTPPHKASQENPFKASLKTKLSSCSSSALACKRVRLSEAGLCGPPALTPTLG
GGPSRKGPEQTELYAQLSKASTALPNSVVTATTGGCQEEPRGFSDHDYCQSPAASTKRDA
DANVANAAYATVTMTTTTTTPLMPNPVMAEDRHVKCKDSAMPPSSFSSSSSSSTSSPTSS
SSLAKQLQQSSYPVATEARGQGARGQDRTPTTQTRAPPPQTLDGDQHSTSRKQPLRDQEI
RAELNKHFGRPQQAIYSQGEKGGELVVEEGGQGGGEKVVAPQASEENPAGDEYYCKLPGS
GSTGYLHPGLPPFHEELELQDRGVEGRYLYPWEGTPLEMLFESCSPSCSPSSCSPSRGSV
SPLSSLLLSPRHFVWPRSGSPSSRSRSRSRSSSSHHRRRSLSSSPDGRPSSRSRHNMDSS
TYRSRTHKSPHSQSRSQSRSPLSRRPRYDSYEEYQHERLKREEYRQDYQKRESQRAEQRE
RQSEKAIQEERRVVYVGRLRSDSTRTELKRRFEVFGEIEECAVNLRDDGDNFGFITYRYT
CDAFAALENGHTLRRSNEPQFELCFGGQKQFCKSNYTDLDSHSDDFDPASTKSKYDSMDF
DSLLREAQRCLRR
NT seq
3822 nt
NT seq
+upstream
nt +downstream
nt
atggcgtgggacaggtgtaaccaggactcggtctggagagaattagagtgtgctgccttg
gttggcgaagaccaacccctctgtccggacctccccgaactcgacctctcagagcttgat
gtcagtgacctggatgcggacagcttcctgggcgggctcaagtggtacagtgaccaatca
gagataatttccagtcaatatggcaacgaggcttccaacctctttgagaagatagatgag
gaaaatgaggccaacttgctggcagtgcttacagaaacgctggacagcatcccagtggac
gaggacggattgccttcgttcgaggccctggcagatggggacgtgaccaatgccagcgac
cagagctgtccctgcacccccgacggttcgccgcgcacccccgaaccagaggagccctcc
ttgctgaagaagctccttctggcacccgcaaactcccagctcagctataatcaatacata
ggcgacaaggcacaaaaccatgcagccagcaaccaccggatcagaccaacacctgctgtt
gtcaagacggagatctcctggaacagcaagccgagggggggctgtccgcagcagagccgt
ctagtgaggcgcccgtgcaccgagctgctcaagtacctgactgccaccgacgacatcctc
ctccagaccaaagccagcgacgccaagagcgcctgggggggtggtggcaaagacaagggc
ggcctgctgggcgcctcctcctccacctcctcgtcgccgtcctcctcctccacctcctcc
ttctcctccctctcctcctcctcctctatcgcctccaagaagaagtcgtcctcgtcgtcc
gtcgtgtcgcaacagcagcagcagcagcatcaccagcgaggtgagagccgggctgctggc
gagtgtagtgtggctggtgtgggggctgggaagtggcgtcgttgcgctcatggggctggt
ggcactgagggacagtccgaacccgcggcggcacccgctcctgtccccccaacacgtagg
aacggcagtggccatgcccgccccaaactggagcgcaggccgtccagtgaagaaggaagg
ccgccaggtccgcagcctgcggtggatgcggggcgcctggcagccgctaggttcattagg
tacatgcattcttattctctccttcctagagagacgggtcagacaggcagctgtgggcgt
tgccctgaggtgggcactgccactcaggctagcgagtgctggggcgggcatggccgtggt
gcggcagcgcgtaggcacatcacagtgaccataaagaaaagagaggaggagccggggcat
ccgttgcttagccagttgctgacctccaagcagaggcccgccagctatcgggcccacttg
ctcctgcccgctactacccctcagccccgcaagagcagttcatcaagaatgagctctgga
gtcctggagagggatcagtgtcccagccaggctattgaggtggaggagaagtacagaggc
actgtcaatatcaatcccggcagctggggtctcagacaggccaaggagcctgattcggac
cccctgttggccgagagcttaggcctaggcagctgggttagccagtcagaccaggggcta
gatttggggctggagctgggcttgggttggccggaggttggcctggtggagcaggctggc
tgtttcggggaggaggtccgcgatgatgatgccatgggcagccccatggcgctctcacag
ggcctgccatgcccactcttcccagattctagaattccagaccccactccctccttcaca
caagggcagcagcacctacacatgcaggcagtctgcgggcaccccgatgaccagggcctc
ctgttgttagccaaaccaaccaccttgccacttcctttgaccccagagtctccaaatgac
cacaagggatcaccgtttgagagcaaatccattgaacgcacattgagtgtggagatctct
ggaaccccaggtctgacaccacctaccacgcccccccacaaagccagtcaagagaaccct
ttcaaagcatcactcaaaaccaagttgtcttcatgctcctcgtctgccctggcgtgcaag
agggttcggctgagcgaggcgggcctctgcggccccccagccctaaccccgaccctaggt
gggggtccctccaggaagggccccgagcagactgaactgtatgcccagctgagcaaagcg
tccactgccctccccaactcggtggtcaccgcaacgacagggggttgccaggaggagccc
cgcggcttcagcgaccacgactattgtcagtcgccggcggccagcacaaaacgggacgct
gacgctaatgtggctaacgcagcttatgctactgttaccatgacgactactacgacaacc
cctctgatgcccaatccggtcatggcggaggacaggcatgtgaaatgtaaggactcagcc
atgccaccctcctccttttcttcttcctcctcctcttctacgtcttctcctacatcttca
tcctctttggccaagcagctgcagcagagctcttaccctgtggctacggaggctcggggg
cagggtgctcggggacaggaccggacccccaccacccagacaagagcacccccaccacag
accctagatggggaccagcattccaccagcaggaagcagcccctgcgagaccaggagatc
cgggcggagctcaacaagcactttggccgtccccagcaagccatttacagccagggtgag
aaggggggggagttggtggtggaggagggggggcagggaggaggggagaaggttgtcgcc
ccgcaggcgtccgaggagaaccctgctggggacgagtactactgcaagcttcctggttct
ggttctactgggtacctgcacccgggtctcccgcccttccacgaggaacttgagctccag
gaccgtggcgtggaggggcgctacctctacccctgggagggcacccccctggaaatgctt
ttcgagtcctgctcgccgtcctgctcgccgtccagctgctccccctcacggggctccgtc
tcacccctctcctccctcctcctctcccccagacactttgtctggccccgttcgggctcc
ccctcctcccgttctcgctcccggtcccgcagttcctcctcccaccaccggaggcgctcc
ctctccagctcacccgacggacgcccctcctccaggtctcgtcacaacatggactccagc
acttaccgatccaggacccacaaaagccctcactcgcagtctcgatctcagtccagatcc
cccctcagccgcaggccaaggtacgacagctacgaagaataccaacacgagcgtctgaag
cgggaggagtatcgccaggactaccagaagagggagtcccagagggccgagcagagggag
aggcaaagtgaaaaagcaatacaggaggagagacgggtggtgtacgtggggagactgagg
tccgacagcacgcgaaccgagctaaagcggcgttttgaagtcttcggcgagatcgaagag
tgtgccgtgaacctgagagatgacggggacaattttggtttcatcacctaccgctacact
tgtgacgccttcgctgcccttgaaaacggacacaccttgcgccggtcaaacgagccccag
ttcgagctgtgcttcggtggacaaaagcagttctgcaaatcgaattatacagacttggat
tcccattctgatgactttgatccagcctccactaaaagcaagtatgactccatggatttt
gacagcttgctgagagaggcccagcgctgcttgagaaggtaa
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