Oncorhynchus mykiss (rainbow trout): 100462976
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Entry
100462976 CDS
T07259
Symbol
oclna
Name
(RefSeq) occludin
KO
K06088
occludin
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy03272
Virion - Hepatitis viruses
omy04514
Cell adhesion molecules
omy04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
100462976 (oclna)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
100462976 (oclna)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
100462976 (oclna)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
omy01009
]
100462976 (oclna)
Protein phosphatases and associated proteins [BR:
omy01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
100462976 (oclna)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Occludin_ELL
MARVEL
YldA
SUR7
NnrU
Swi5
DUF2381
GreA_GreB_N
Cation_ATPase_C
Motif
Other DBs
NCBI-GeneID:
100462976
NCBI-ProteinID:
NP_001177375
Ensembl:
ENSOMYG00000008445
UniProt:
D7NZJ0
LinkDB
All DBs
Position
5:23873604..23883341
Genome browser
AA seq
499 aa
AA seq
DB search
MSSKHNGSPPPYESDGYHEPPQPAYSYYPDDEFQHFYKWTSPPGIIKLMAIIIIVLCVAI
FACVASTLAWDSQGAMSGFGGYGGSSYGGSSYGGGGYSGSFGGAAYGAGNNYGYGGLGGN
YNDPRTGKGFIIAMAAFSFITALVIFIIVVSRHGLSESRRFYLAVVIICAILALLMLIAT
IVYLVAVNPMAQSTGSIYGSQLAGLCAQYQGPQVSGMLVNQYLYHYCVVDPQEAIAIVFG
FLVMAALIIMMVFALKTRQKIRNYGKSNVLWRKVKIINEEAPPQDVEAWVNNVSGFPDEG
VVLTDYPEKFGGSRSHLDDTSTNYDKPPYNDSPVPPVVCDFPVHSSAPYSSGSEMASSAA
GKPKKRRAGRPRRTDGQDTDYASSGDELDDDNDFDSEFPTIANEQERVDYKREFDRDHQE
YKDLQGELDIINKSLSEVDRELDELQEGSPQFLDAMEKYNRLKDIKKSADYQLKKRRCKY
LKAKLSHIKKMVGDYDRRA
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atgtcttccaagcacaacgggagtccgcctccctatgagtcagatggatatcatgagcca
ccccagccggcgtactcctactaccccgacgatgagttccagcacttctacaaatggacg
tctcccccgggcatcatcaagctgatggccatcatcatcattgtcctctgtgtggccata
tttgcctgtgtggcctctacgctggcctgggacagccagggggccatgtctggcttcggt
ggttacgggggcagctcgtatgggggcagctcgtacggaggcggtggttactccggtagc
tttggtggtgctgcctatggtgccggtaacaactatggctacggcggactcggagggaac
tacaatgaccctcgcactggcaaaggattcatcattgccatggcagcattcagcttcatc
acggcccttgtcattttcatcatcgtggtgtcgaggcatggcctgtcggagtctagaagg
ttctacctagctgtggtgatcatctgtgctatcctggccctgctgatgctcatagcgact
atagtgtacctggtggcggtgaaccccatggctcaatctacagggtcgatctatgggagc
cagctggcaggcctgtgtgcccagtaccagggcccccaggtttcaggaatgttggtcaac
cagtatctctaccattactgtgtggtggatcctcaggaggccatagcgatagtgtttggc
ttcctggtgatggcggctctgatcatcatgatggtgtttgccttaaagacgcgccagaaa
atcaggaattatggcaagtccaacgtcctgtggaggaaggtgaagatcatcaacgaggag
gccccgccccaggacgtggaggcatgggtgaacaatgtgtcaggttttcctgatgaaggt
gtggtgctgaccgactacccagagaagtttggaggatccaggagtcacctggacgacacc
agcaccaactacgacaaacctccctacaatgacagcccagttcctccagtagtttgtgac
ttccctgtgcacagtagtgccccctacagcagtggctcagagatggccagctcagcagca
gggaagcccaagaagagacgggccggtcgtcctcgccgtactgatggacaggatacagac
tacgcttcctctggggacgagctggatgacgacaatgacttcgacagtgagttccccacc
attgccaatgagcaggaacgtgtggactacaagcgtgagtttgaccgggatcaccaggag
tacaaggacctgcagggagagctggacatcatcaacaagagcctgtcagaggtggacaga
gagctggatgagctgcaggagggaagcccccagttcctggatgctatggaaaagtacaac
aggctaaaggacataaagaagtcagcagattaccagttgaagaagcgcaggtgtaaatac
ctgaaggccaaactgtcccacatcaagaagatggtcggtgactacgatcgcagggcctga
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