Oncorhynchus mykiss (rainbow trout): 100499174
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Entry
100499174 CDS
T07259
Symbol
irf-10
Name
(RefSeq) interferon regulatory factor 10
KO
K09445
interferon regulatory factor 4
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
omy03000
]
100499174 (irf-10)
Transcription factors [BR:
omy03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
100499174 (irf-10)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF-3
IRF
MH2
Motif
Other DBs
NCBI-GeneID:
100499174
NCBI-ProteinID:
NP_001297068
Ensembl:
ENSOMYG00000026797
ENSOMYG00000026820
UniProt:
D8FRP0
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Position
28:complement(15486073..15502959)
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AA seq
474 aa
AA seq
DB search
MVREMNLEGDSGLSVSCGNGKLRQWLIDQINSSSYPGLVWENGEKSIFRIPWKHAGKQDY
NREEDAALFKAWALFKGKHREGVDKPDPPTWKTRLRCALNKSNDFDELVERSQLDISDPY
KVYRIIPEGAKRGIKMAETTLHMSSESNYPMHSLYPTLHSQVSGSYIVPQERKEWKEYSH
TQDHQQQPQPQHHQPPHVELQYSQCHYPSPLSRLWHTGPHTDNGYQFTGSFYSYSSSESH
PTAFTMDHNMATLSDFRLHVSLFYREALVKKVTTSGPEGCQITSSSSSSSSSSSPSSPCP
GDKLYSGAEVVLFPSPYPESQRRGAEKLPNVLERGVLLWMASDGLYAKRLCQSRVYWEGP
LAPYTDKPNKLEKEQTCKLFDTQQFLTELQGYAQHGRPMPRHQVVLCFGDEYPDPQRQTK
MITAQVEPMFARELLYFTQQNSSHYLRDYELQGHTESSPPAPGDYQRTLQHMQE
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atggttagagagatgaacttagagggggacagcggtctgtcagtgagctgcggcaacggg
aaacttagacagtggctgatcgatcagattaacagcagtagctatcccggactggtttgg
gagaatggcgagaaaagcattttcaggatcccgtggaaacatgcgggcaaacaggactac
aatcgagaggaggatgctgcactcttcaaggcttgggcattgttcaaagggaaacacagg
gaaggagtggacaaaccagacccccccacatggaagactagactgcgatgtgctcttaac
aaaagtaatgactttgacgagctggtggagagaagccaacttgatatatcagacccttac
aaagtctacagaatcataccggagggagctaagagagggatcaagatggcagagacaacg
ttacatatgagctcagagagcaactaccccatgcactctctgtacccaactctacacagc
caggtgtctggcagctacatagttccccaggagaggaaggagtggaaggagtacagccac
acacaggaccaccagcagcaacctcagcctcagcaccatcagccaccccacgttgagctg
cagtatagccagtgccactacccatcgccactcagccgactgtggcacaccgggccacac
acagataacggttatcagttcactggctccttctattcatactcctcctcagagtcccac
cccacagcatttacaatggaccacaacatggccaccctttctgacttccgactgcatgtg
tccctgttctaccgtgaggctttggtcaagaaggtaaccacctctggtcctgaaggctgc
cagatcacctcgtcttcctcctcctcttcctcctcttcctctccgtcctccccctgccct
ggggacaagctgtacagcggtgcagaagtggtgctgttcccgtccccttaccccgagtca
cagaggaggggggcggagaagctacccaacgtcctggagaggggcgtgctcctgtggatg
gcgtcagatgggctctatgccaagcggctttgccagagccgagtgtactgggagggcccg
ctggccccgtacacggacaaacccaacaaactggagaaagaacagacctgcaagctgttt
gacactcagcagttcctcactgagctgcaggggtatgcccaacatggccgtcccatgccc
aggcaccaggtggtgctgtgtttcggtgacgagtacccagatccccaacgccagaccaag
atgatcacagcacaggtggagccaatgtttgccagggaactgttgtacttcacccagcag
aacagcagtcactaccttagggactatgagctccagggacacacggagagctcccctcca
gctccaggagactaccagaggaccctccaacacatgcaggagtaa
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