Oncorhynchus mykiss (rainbow trout): 100505416
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Entry
100505416 CDS
T07259
Name
(RefSeq) peroxisome proliferator-activated receptor gamma
KO
K08530
peroxisome proliferator-activated receptor gamma
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy03320
PPAR signaling pathway
omy04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
100505416
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
100505416
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
omy03000
]
100505416
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
omy03310
]
100505416
Transcription factors [BR:
omy03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
100505416
Nuclear receptors [BR:
omy03310
]
1. Thyroid hormone like
1C. Peroxisome proliferator-activated receptor (PPAR)
100505416
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
PPARgamma_N
Motif
Other DBs
NCBI-GeneID:
100505416
NCBI-ProteinID:
NP_001184141
Ensembl:
ENSOMYG00000037258
UniProt:
E2IH99
LinkDB
All DBs
Position
9:complement(37429893..37436194)
Genome browser
AA seq
587 aa
AA seq
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MVDTRRAAWSLLSFGLGTLDLAEMDNKMNSFDMETLSTLDYPYLPSLEYSHNSPHHHSPD
RSHSFNHSPDRSQSFNHSPDRNHSINHSPDRSYSYNHRSDRSHSFNHSPDRSHSFNHSPD
RSQSFNHSPDRNHSINHSPDRSHSYNHRSDRSHSFNHSPDRSHSFNHSPDRSHSFNHRSD
RSHSFNHSPDKSHSYNYTYSGNQNASSPLNIDCRVCGDKASGFHYGVHACEGCKGFFRRT
VRLKLVYDHCELHCRIHKKSRNKCQYCRFQKCLLVGMSHDAIRFGRMPQVEREKLQAEFM
DVDPRNPESAELRALSRQLCLSYHRHFPLTKSKAKAILSGKTHGNSPFVIHDMKSLTAGQ
YFINCRQLPVLERQRSVLPPEEPAGELELSVFRRIQIRSAEAVQEVTEFAKSIPGFTELD
MNDQVILLKYGVIEVMTTMLAPLMNKDGTLFAYGQIFMTREFLKSLRKPFCEMMEPKFEF
AVKFNVLELDDSDMALFFAVIILSGDRPGLVNVKPIEDLQETVLQALELQLKTIHPDCPQ
LFAKLLQKMTDLRQLVANHVRLIHLLKKQELEVCLHPLLQEIMRDLY
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atggtggacacacggagagcagcgtggtccttgctgagttttgggctgggcacgttggac
ttggcagagatggacaacaagatgaatagttttgacatggagaccctgtcgacgctggac
tacccgtatctcccctctctagagtacagccacaacagtccccaccaccacagcccagac
agaagccactcatttaaccacagcccagacagaagccaatcatttaaccacagcccagac
agaaaccactcaatcaaccacagcccagacagaagctactcatacaaccacaggtcagac
agaagccactcatttaaccacagcccagacagaagccactcatttaaccacagcccagac
agaagccaatcatttaaccacagcccagacagaaaccactcaatcaaccacagcccagac
agaagccactcatacaaccacaggtcagacagaagccactcatttaaccacagcccagac
agaagccactcatttaaccacagcccagacagaagccactcattcaaccacaggtcagac
agaagccactcatttaaccacagcccagacaaaagccactcatacaactacacatacagt
gggaatcaaaacgccagctctccgctcaatattgactgtagagtgtgtggggacaaggcc
tcaggcttccactatggcgtccatgcctgtgagggctgcaaggggttcttccgcagaacc
gtgcggttaaaactggtgtatgaccactgtgagctgcactgtcggattcacaaaaagagc
cggaataagtgccagtactgtcgctttcagaaatgtctgcttgtgggcatgtcacacgat
gccatccgcttcggccggatgccccaggtggagagagagaagctgcaggctgagtttatg
gatgtggaccccaggaacccagagtcagcggaactgagagccctgtccagacagctgtgc
ttgtcctaccacagacactttcccctgaccaagagcaaggccaaggccatcctctctgga
aagacccacggaaactcaccgtttgtcatccatgacatgaagtctctgacggcgggtcag
tactttataaactgtagacagctcccagtactggagcgccagaggtccgtcctgccccct
gaggagcctgctggggagctggagctctccgtcttccgccgtatccagatccgctccgca
gaggccgtacaagaggtcacagagttcgccaagagcatccctgggttcacagagctggac
atgaacgaccaggtgatcctgctgaagtacggggtcatcgaggtcatgacgaccatgctg
gcgccgctcatgaacaaggacggcacactgtttgcctatggacagatcttcatgacccga
gagttcctcaagagcctgaggaagcctttctgtgagatgatggagcccaagtttgagttt
gcggtaaagttcaacgtgctggagctggacgatagtgatatggcgctcttcttcgccgtc
atcatcctcagtggagaccgtccaggcctggtgaacgtgaagcccattgaggacctccag
gagacagtgctgcaggccctggagctgcagttgaagaccatccacccagactgcccccag
ctgttcgccaagctactgcagaagatgaccgacctgcggcagctggtggccaaccacgtc
cgcctcatccacctgctcaagaagcaggagctggaggtgtgtctgcatcccctactgcag
gagatcatgagagacctgtactaa
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