Oncorhynchus mykiss (rainbow trout): 100653442
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Entry
100653442 CDS
T07259
Symbol
abcb5
Name
(RefSeq) ATP-dependent translocase ABCB1 isoform X1
KO
K05660
ATP-binding cassette, subfamily B (MDR/TAP), member 5
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
100653442 (abcb5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
omy02000
]
100653442 (abcb5)
Transporters [BR:
omy02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
100653442 (abcb5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_22
AAA_21
RsgA_GTPase
Rad17
AAA_16
AAA_5
AAA_7
AAA_29
AAA_28
AAA_25
Zeta_toxin
Motif
Other DBs
NCBI-GeneID:
100653442
NCBI-ProteinID:
XP_036821525
LinkDB
All DBs
Position
3:2258551..2284314
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AA seq
1341 aa
AA seq
DB search
MGREDGDMPDSLPTIPEEVFAKGYSNLAFHEDKKPQERMTEGQPTVDTEHKPKKGLGRKK
KEPAKAVGFFQLFRYATGCEVLLMIIGLLCAALHGIALPLMCVVFGQMTDSFVQSGQQLN
LTANFTVEEISALLNSTDGCIQIPGVDIEALMTRHAYYFVGIGCAVFLLGTFQVMLFLLT
ATKQTKRIREKYFHAILHQQMSWFDTHQIGVLNVRLTDDINTINEGLGDKICVFVQFFCT
FLSGFIIGFIFGWKLTLVILAVSPLLAGSAAVWSKILATLTSKELSAYAKAGAVAEEILV
AIRTVVAFNGQKKAVERYERNLEDAKNFGIKKAITTNVSMGFTQFVIFGTYALAFWYGTK
LSVDEPENYTIGKTITVFFSVMIGAFSLGQGAPNLEAIAKARGAAYEVYNTIDQPRPIDS
SSKEGHKPDCVKGDIEFKNIHFSYPSRKDVKILQGVNLTVPRGKTIALVGASGCGKSTTI
QLLQRFYDPDSGEITLDGRDIRTLNVKWLRENMGIVSQEPVLFGTTIAENIRYGREDATD
EDIERAVREANAYDFISKLPDKLNTMVGERGAQLSGGQKQRIAIARALVKNPKILLLDEA
TSALDTQSESVVQAALDKARAGRTTIVIAHRLSTIRTADVIAGFSNGEVVEQGTHRELMA
KKGVYYSLVMQQSQGKPEEDEEDPVEEDNPPKYEDLDYVLYDSSDMDELEVGNEEGIENG
GFEKNSISSGRVEMKPTRRKSKKSKKDKKKEKKPDEAPDIPFTRILALNKPEWPYMLVGT
LSSLVGGAVYPCVAIIFAKIIGVFSEVDPEVKRQKTMMFSLLFLLIGGVAFVTYFLKGYM
FGKSGELLTMRLRRQVFHAMMRQEIGWFDDNNNAVGVLTTRLATDASLVKGATGSRLGLA
TNTVCALTIAIVVAFIHSWQLTLLILACVPFLIGANFIQMRAMAGHASKDQGALEQSGKI
STETVENFKTVVGLTREDVFFHKFMDSLERPYQNGLVKAPIYGLTFAVAQAIPYMVNAAI
FRFGSWLIAHCHTEYENVFLVFSVIIFAAMNIGESASFAPDFAKAKAAAGRILGLLEKKP
EIDIYSEEGEKPTDFVGDIEFRGIHFAYPTRQNVRVLQGLNVSVGPGQTLALVGESGCGK
STSIQLLERFYSPAEGQVLVDGLDTKTLNLSWLRSQLGLVSQEPILFDCSISENIQYGDN
SREVSQDEIEEAAKNANIHDFIMGLPEKYNTRVGDKGTQMSGGQKQRIAIARALVRQPKV
LLLDEATSALDTESEKIVQQALDAARQGRTCIVIAHRLSTIQNADQIAVIQYGQVTEQGT
HTDLMAKGGAYYALVNAQVNH
NT seq
4026 nt
NT seq
+upstream
nt +downstream
nt
atggggagagaggatggggacatgccagactctctaccaaccatccctgaggaggtattt
gcaaaaggctactccaacctggccttccatgaggataagaagcctcaggagcggatgaca
gaggggcagccaaccgttgacacggagcacaagccaaagaagggcctcggaaggaagaaa
aaagaaccagccaaagcagtgggatttttccagttgttccgttacgctactggttgtgag
gtgctcctgatgataatcggcctgctatgtgctgccctccacgggatagccctgcccctt
atgtgtgttgtgtttggacagatgaccgacagctttgtacaaagtggacagcagctcaac
cttacagccaatttcactgtggaggagatcagcgctttattgaactcaactgacggatgt
attcaaattcctggagttgatatagaggctctaatgactcgacatgcctattacttcgtt
gggatcggttgtgctgtgttcctgctggggacctttcaggtgatgttgttcttgttgaca
gccaccaaacagaccaaacggatccgggagaaatacttccatgccatcctccaccaacag
atgtcctggtttgatacacaccagataggagttctcaacgtcaggttaacagatgacatc
aacacaatcaacgaaggccttggagacaagatctgtgtgttcgtgcagttcttctgcacc
ttcttgtcagggttcatcattggtttcatcttcggctggaagctaaccctcgtcatcctg
gccgtcagtcctctcctggcaggatcagctgccgtctggtccaaaatacttgccaccctg
accagtaaggagctgtctgcctatgccaaagcaggggcggtagctgaagagatactggtg
gctatcaggacagttgtggctttcaatggacagaagaaagctgtggaaaggtatgaaaga
aacttggaggatgctaaaaactttggaataaagaaagccatcaccactaacgtgtccatg
ggcttcacccagtttgtcatatttgggacgtacgccttggctttctggtacgggaccaag
ctctctgtagacgagcctgaaaactacaccattggaaaaaccattacagtcttcttctct
gtgatgattggggcgttctctttgggccagggtgcgcctaacttggaagccatcgccaaa
gcccggggtgctgcctatgaagtctacaataccattgaccagccgcggcccatagacagc
agttcaaaggaaggtcacaaaccagactgtgtgaaaggagacattgaattcaagaacatc
cacttcagctacccctccaggaaagacgtcaaaattcttcaaggagtgaatctgacagtg
cctcgtgggaagaccatagctctggttggagccagtggatgtgggaagagcaccaccatt
cagctgctgcagcgcttttatgatccagactcaggagagattaccctggatggtcgggac
atccggaccctgaatgtgaagtggctgagggagaatatgggtatcgtcagtcaggaacct
gtgctattcggaacaaccattgcagaaaacatccgctatggcagagaggacgccacagat
gaggacatcgaacgggctgtgagagaggccaacgcgtacgacttcatctccaaactcccc
gataagctgaacaccatggtgggggagcggggagcccagctcagtggaggacagaagcag
aggatagctatcgcccgggccctggtcaaaaacccgaagatcctcctgctggacgaggcc
acctccgccctggacacccagagtgagtcggtcgttcaggccgctctggataaggccaga
gcgggccgcaccacaatagtgatcgcccaccgcctgtccaccatcagaacagctgacgtg
atcgctggcttcagcaacggagaggtggtggagcagggaacacacagggaactcatggcc
aagaagggggtttactactctctggtcatgcagcagagtcaagggaagccagaggaagat
gaagaggaccctgtggaagaggataaccctcctaaatatgaggatctggattatgtccta
tatgactcatctgacatggatgagctggaagtgggaaacgaggaaggaatagaaaacggc
ggctttgaaaagaactcaatcagcagtggccgtgtggaaatgaaaccgaccaggaggaaa
tctaagaagtccaagaaggacaagaagaaggaaaagaaaccagatgaagctccagacatc
cccttcaccagaatcctggccttgaacaagcccgagtggccgtacatgttggtaggaacc
ctgtctagcttggtggggggagccgtttatccctgtgtcgccatcatcttcgccaagatc
attggagtgttttccgaggttgacccggaagtcaaacgacagaaaaccatgatgttttcc
ctgctcttccttctcatcggaggagtggcttttgtcacctacttcctaaagggttacatg
tttggaaaatcaggagagcttcttaccatgaggctgaggaggcaggtattccatgccatg
atgagacaggagattggatggtttgatgacaacaacaatgcagtgggagttctaaccacc
agattggccacagatgcatctctggttaaaggggcgactgggtctaggttgggtctggcc
accaacacagtctgtgctctcaccatcgccattgtggtggccttcatccacagctggcag
ctcaccctcctcatcctcgcctgtgtgcccttcctcattggagccaacttcattcagatg
agggcaatggcaggccacgcctccaaagaccagggtgccctggagcagtctgggaagata
tctacagagaccgttgaaaacttcaagacagttgttggattgacacgggaggacgtcttc
tttcacaagttcatggacagtctagaaagaccataccagaacggtttggtgaaggctccc
atctacggactaacatttgccgttgcccaagcaatcccttacatggtcaatgctgcaatc
ttccgcttcgggtcctggcttattgctcactgtcacacagaatatgaaaatgttttcctt
gtgttttctgtgatcatatttgctgccatgaacataggagaatcagcatcttttgctcct
gactttgccaaagcgaaagcagctgcggggagaattcttggcttgttggagaagaaacca
gagattgacatttacagtgaggagggagagaagccaacggactttgtcggggacattgag
ttccgagggatccactttgcgtacccgacccgtcagaacgtgagggttctccaggggttg
aacgtgtcagtggggcctggtcagaccctggccctggtcggagagagtggctgtggtaaa
agcacctccatacaactactggagcgcttctatagccctgctgaaggacaagtgttagtg
gatgggttggatactaagaccctgaacctgtcgtggctgaggtctcagctgggcctggtg
tcccaggagcccatcctgttcgactgcagcatctcagagaacatccagtatggggacaac
agcagagaggtctctcaggatgagatagaggaggcagccaagaacgccaacatccatgac
ttcatcatgggcctgccagagaaatacaataccagggttggggacaaggggacccagatg
tctggaggtcagaaacagaggatagccatcgccagagcactggtcaggcagcctaaagta
ctgctgctggatgaagccacttccgccctggacacagagagtgagaagattgtccaacag
gctttagacgccgcccggcagggccgcacctgcatcgtgatcgcccaccgcctgtctacc
atccagaacgcagaccagatagcggtaattcagtatggtcaggtgacagagcagggtaca
catactgacctcatggctaaagggggggcttactatgccctggtcaacgcacaggtcaac
cactaa
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