Oncorhynchus mykiss (rainbow trout): 100653451
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Entry
100653451 CDS
T07259
Name
(RefSeq) nectin-1 isoform X1
KO
K06081
poliovirus receptor-related protein 1
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy03266
Virion - Herpesvirus
omy04514
Cell adhesion molecule (CAM) interaction
omy04517
IgSF CAM signaling
omy04520
Adherens junction
omy05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03266 Virion - Herpesvirus
100653451
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
100653451
04517 IgSF CAM signaling
100653451
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
100653451
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
100653451
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
omy04515
]
100653451
04090 CD molecules [BR:
omy04090
]
100653451
Cell adhesion molecules [BR:
omy04515
]
Immunoglobulin superfamily
Nectin family
100653451
CD molecules [BR:
omy04090
]
Proteins
100653451
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
ig
V-set
Ig_2
C2-set_2
I-set
C1-set
Ig_NUP210_13th
Motif
Other DBs
NCBI-GeneID:
100653451
NCBI-ProteinID:
XP_021432774
LinkDB
All DBs
Position
21:21991218..22007807
Genome browser
AA seq
407 aa
AA seq
DB search
MKNQTYFWVLVDLCLMLTQTGVGIRVISYNGRPTVTQGQHADLTCELMETNEELIQISWQ
KSTRGYRANHNFFFITPSQGPSHVKGRGDRVGFIGNTTALVGSIRLGDVSLTDEGVYTCI
FTVFPSGPYKAEIHLNVQIPPVISVAVETPPVVAEGQESILATCTAANAKPPADVRWSTA
SARQPLSLTTSTNTTLNPDDTATVRVHLKGEPSRVMHQQEVQCLVNHTTLSQQKVVPYEI
DIHYPPNSVKIIIHEKPPQAPAFQCVVDANPPPSEFTWKRLNRSNLSETGGLLELVKVGP
DFSGLYSCEVSNPYGAASGFLYVHKVDQRSIVPVALWVFLPILLLFLCIVTVSLWLLFSR
GPLRGRAMALFFCSGEAIQNPGRVSRKELQDSPVCESVEVEKQNVAV
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaatcaaacatatttctgggttctggtggacctctgtctcatgctgactcagact
ggagttggtatcagagtcatctcttacaatggccgcccaacagtgactcagggacaacac
gcagacttgacctgtgagctcatggagacaaacgaggagctcatccagatctcatggcag
aagagtaccaggggttaccgtgccaaccacaacttcttcttcatcacccctagccagggt
ccatcacatgtcaaggggcggggggacagggtgggcttcattgggaacaccactgcgctg
gtgggctctatccgactgggggatgtgtccctgactgatgagggcgtctacacttgcatc
ttcactgtgttccccagtgggccatacaaggcagagatccacctcaatgtccaaattcct
cctgtgatttcggttgctgtggagactccacccgtggttgctgaggggcaggagagcatc
ttggccacatgcacagcggctaacgccaagccccctgcagatgtacggtggagcacggcc
agtgcaagacaaccactgagtctgacaacctcaaccaacactacactgaatccagacgac
accgccacggtgagggtccacctgaagggagagccctccagagtcatgcaccaacaggag
gttcagtgcctggtgaaccacaccactctgagccagcagaaggttgttccctacgagatc
gatatacactatcctccaaattcggtcaaaatcatcattcatgagaagccaccccaggca
ccggcgtttcagtgtgtagtagatgccaacccccctccatcagagttcacatggaagaga
ctgaatagatcaaacctcagtgagactgggggcttgttggagttagtgaaggtgggccct
gacttcagtggtctgtacagctgtgaggtgtccaacccatacggagcagcatctggtttc
ctatatgtgcataaagttgatcagcgctccattgtaccagtagccttgtgggttttcctc
cccatactcctcctcttcctctgcattgtaactgtatcactctggctgttgttttccaga
ggacccctgagagggagagccatggcactgtttttttgtagtggagaggccatccaaaac
ccaggaagggtaagccgtaaagaactgcaggattctccagtgtgtgagtccgttgaggtt
gagaaacagaatgttgcggtttga
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