Oncorhynchus mykiss (rainbow trout): 110485112
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Entry
110485112 CDS
T07259
Name
(RefSeq) exportin-1
KO
K14290
exportin-1
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy03008
Ribosome biogenesis in eukaryotes
omy03013
Nucleocytoplasmic transport
omy03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
110485112
03008 Ribosome biogenesis in eukaryotes
110485112
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
110485112
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
omy03019
]
110485112
03009 Ribosome biogenesis [BR:
omy03009
]
110485112
03016 Transfer RNA biogenesis [BR:
omy03016
]
110485112
03036 Chromosome and associated proteins [BR:
omy03036
]
110485112
Messenger RNA biogenesis [BR:
omy03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
110485112
Ribosome biogenesis [BR:
omy03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
110485112
Pre-60S particles
110485112
Transfer RNA biogenesis [BR:
omy03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
110485112
Chromosome and associated proteins [BR:
omy03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
110485112
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CRM1_C
Xpo1
CRM1_repeat_2
CRM1_repeat_3
CRM1_repeat
IBN_N
TPR_TNPO3_IPO13_2nd
BspA_v
Motif
Other DBs
NCBI-GeneID:
110485112
NCBI-ProteinID:
XP_036796547
Ensembl:
ENSOMYG00000035963
LinkDB
All DBs
Position
13:23791653..23807108
Genome browser
AA seq
1070 aa
AA seq
DB search
MPANMTMLADHAARQLLDFSQKLDINLLDNVVNSMYYDIGSQQRMAQEVLTNLKDHPDAW
TRVDTILEFSQNMKTKYYALQILETVIKTRWKILPRNQCEGIKKYVVGLIIKTSSDAANV
EKDGVYIAKLNMILVQILKQEWPKHWPTFISDIVGASRTSESLCQNNMIILKLLSEEVFD
FSSGQMTQVKAKHLKDSMCNEFSQIFQLCQFVMENSQNAPLVQATLETLLRFLNWIPLGY
IFETKLISTLVYKFLNVPMFRNVTLKCLTEIAGVSVNQYEEQFVNLFTLTMDQLKQMLPL
NTNIRLAYSNGKDDEQNFIQNLSLFLCTFLKEHGQLIEKRPNLRETLVEALHYMLLVSEV
EETEIFKICLEYWNHLAAELYRESPFSTSTSPLLSGSQHFDVPPRRHLYLPVLSKVRTLM
VSRMAKPEEVLVVENDQGEVVREFMKDTDSINLYKNMRETLVYLTHLDYADTERIMTEKL
HNQVNGTEWSWRNLNTLCWAIGSISGAMHEEDEKRFLVTVIKDLLGLCEQKRGKDNKAII
ASNIMYIVGQYPRFLRAHWKFLKTVVNKLFEFMHETHDGVQDMACDTFIKIAQKCRRHFV
QVQVGEVMPFIDEILNNINTIICDLQPQQVHTFYEAVGYMIGAQTDQAVQEHLIEKYMLL
PNQVWDSIIQQATKNVDILKDAETVRQLGSILKTNVRACKAVGHPFVVQLGRIYLDMLNV
YKCLSENISSAIQTNGEMVTKQPLIRSMRTVKRETLKLISGWVSRSNDPQMVGENFVPPL
LEAVLIDYQRNVPAAREPEVLSTMATIVNKLGGHITGEIPKIFDAVFECTLNMINKDFEE
YPEHRTHFFYLLQAVNSQCFPAFLSIPPAQFKLVLDSIIWAFKHTMRNVADTGLQILYTL
LQNVAQEEAAAQSFYQTYFCDILQHIFSVVTDTSHTAGLTMHASILAYMFNLVEEGKIST
SLNPASQNNQGYVQEYVANLLKTAFPHLQDAQVKVFVTGLFSLNQDIPAFKEHLRDFLVQ
IKEFAGEDTTDLFLEERETSLRQAQEEKHKLQMSVPGILNPHELPEEMCD
NT seq
3213 nt
NT seq
+upstream
nt +downstream
nt
atgccagcaaacatgacaatgttggcggatcatgcagcaagacagctgctagacttcagt
caaaagctggacatcaatctgctggacaatgtagtcaactccatgtactatgacattgga
tcacagcaacgcatggcccaggaggtgctgaccaacctcaaggatcacccggacgcatgg
acacgagtcgacaccatcctggagttttctcagaacatgaagactaaatactatgcactg
caaattctggagactgtgatcaagacacgctggaagattcttccaagaaatcaatgtgaa
ggaataaagaagtatgtcgttggtctgattatcaagacctcatctgatgccgcaaatgtt
gagaaagatggagtgtacattgcaaaacttaacatgatcctcgtacagatcctgaagcag
gagtggcccaagcactggcctaccttcatcagtgacatcgtgggtgctagccgcaccagc
gagagtctgtgtcagaacaacatgatcatcctcaagctgctcagtgaggaggtctttgac
ttctccagtggacagatgacccaggtcaaggccaagcacctgaaagacagtatgtgcaat
gaattctcgcaaatattccagctctgccagtttgtcatggaaaactcccagaatgcccct
ctggtccaagccacactcgagactctcctgcgtttcctgaactggatccccctggggtac
atatttgagaccaaattgatcagcactctggtgtacaagttcttgaacgtgcccatgttc
cgcaacgtgacgctgaagtgtctgacggagatcgccggcgtgagtgtcaaccagtatgag
gagcagtttgtcaacctcttcacgctcaccatggatcagctcaaacagatgctccccctg
aacaccaacatccgcctggcatattccaatggtaaggacgacgagcagaacttcatccag
aacctcagcctgttcctctgcaccttcctgaaagagcatggacagctcatcgagaagagg
cccaaccttagggagacactcgtggaggctttgcactacatgctgctcgtgtctgaggtg
gaggagacagagatctttaagatctgtctggagtactggaaccacctggcggccgagctc
tacagggagagccccttctccacctccacctcccccctgctttctgggagccagcacttt
gacgtgccgccacgccggcacctctacctgcccgtgctctccaaggtgcgtacgctgatg
gtgagccgaatggccaaaccagaggaagttctggtggtggagaacgaccagggcgaggtg
gtccgagagttcatgaaggacacagactcaatcaacctctataagaacatgagagagaca
ctggtttacctgacccatttggactatgcggacacggagcgcatcatgacggagaagctg
cacaaccaggtcaacgggacagagtggtcgtggaggaacctgaacacgctatgctgggct
atcggctccatcagcggggccatgcacgaggaggacgagaagcgcttcctggtcaccgtc
atcaaggacctgctgggtctctgtgagcagaagagggggaaggacaacaaagccatcatc
gcctcaaacatcatgtacatcgtgggccagtacccacgcttcctccgagcccactggaag
ttcctcaagactgttgttaacaagctctttgagttcatgcacgagactcacgatggcgtg
caggacatggcgtgcgacaccttcatcaagatagcccagaagtgccggcgccactttgtc
caggtgcaggtgggcgaggtgatgcccttcatcgacgagatcctcaacaacatcaacacc
atcatctgtgacctccagccccaacaggtgcacacgttctacgaggcggtgggctacatg
attggggcccagacggaccaggccgtgcaagagcacctcatcgagaagtacatgctgcta
cccaaccaggtgtgggacagcatcatccaacaggccaccaagaatgtggacatcctgaag
gatgcagagaccgtgcgtcagctgggcagcatcctgaagaccaacgtgcgggcttgcaag
gccgtgggtcatcccttcgtggtgcagctaggacggatctacctggacatgctcaatgtc
tacaagtgtctgagtgagaacatctcctctgccatccagaccaacggagagatggtgacc
aagcagcccctgatccggagcatgaggacggtgaagagagaaacgctcaagctgatctca
ggttgggtcagccgctccaacgacccacaaatggtgggggagaactttgtcccgcccctg
ctggaggccgtactcatcgactaccagcgcaacgtccctgccgccagagagcctgaggtg
ctcagcaccatggcgaccatcgtcaataaactgggcggacacatcacaggggagatcccg
aagatcttcgacgcagtcttcgagtgcactttgaacatgatcaataaagactttgaggag
tacccagagcataggacacatttcttctacctcctccaagctgtgaactcgcagtgcttc
ccggccttcctttccattcccccggcccagttcaaactggttctggactccattatctgg
gctttcaaacacaccatgaggaatgttgcagacactggtctgcagattctttacaccctg
ctgcagaacgtggcccaggaggaggctgccgcacagagcttctaccagacctatttctgt
gacatcctccagcacatcttctctgtcgtcacagatacctcgcatacagcagggctaacc
atgcacgcgtccatcctggcatacatgttcaacctggtggaggagggtaaaatcagcacc
tccctcaacccagccagccagaacaaccagggctacgttcaggagtatgtggccaacctg
ctcaagacagccttcccccatctacaagatgcccaggtgaaggtgtttgtaacaggtcta
ttcagcttgaaccaggatatccccgctttcaaggagcacctgagggacttcctggtgcag
atcaaggagtttgctggcgaggacaccacagacctgttcctggaggagcgggagacgtcg
ctgcggcaggcccaggaggagaaacacaagctgcagatgtccgtccccggcatcctcaac
ccccatgagctccctgaggagatgtgcgactga
DBGET
integrated database retrieval system