Oncorhynchus mykiss (rainbow trout): 110485257
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Entry
110485257 CDS
T07259
Name
(RefSeq) ATP-binding cassette sub-family A member 3
KO
K05643
ATP-binding cassette, subfamily A (ABC1), member 3
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
110485257
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
omy02000
]
110485257
Transporters [BR:
omy02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
110485257
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
AAA_23
AAA_15
AAA_22
RsgA_GTPase
SRP54
AAA_29
Motif
Other DBs
NCBI-GeneID:
110485257
NCBI-ProteinID:
XP_036797670
LinkDB
All DBs
Position
13:60041885..60124918
Genome browser
AA seq
1706 aa
AA seq
DB search
MAIARQFGLLLWKNYLQQKRQILVTLVEIALPLLFSGILIVLRENVPFKDYPNATLYQSF
SVDGLQYPLDNYHHYQLAYVPGNASVVRRVAEDVQHSLDPVISSVHGFETEEQFEDFVRK
DPQSRKVLAAVVFEHSFTHDDEPLPQQVSYHLRFSFSPRNAPAKEKSELNINNDFDWHTL
NLFPLFQLPGPREQYDLQGGTPGYFREGFLAVQHAVNQAIMRSYNSTGAAWLLSHTRVVL
RRFPFPPFIYDVFILAIQNQLPLLLVLSLTYTSLNIVRAVVQEKERKLKEYMRMMGLSNW
LHWTAWFLMFFLFLAISMFFVTLLFCIKVSPNGAVLTYSDPTLVFVFLLVFAVATINFSF
MISAFFSRANVAAAAGGFIYFLSYLPYVFLWPRYDLLSHAQKVSACLISNVAMAMGAQLL
GMFEGKGTGIQWCNLFESVTVDDDFSLAQVLGLLLLDALLYGLVAWYVEAVFPGEYGVPL
PCYFFLLPSYWCSSPRMAMVKEEEDVEKALKGEFIEEEPAGLVSGVKIKHLNKEFKVGNK
TRQAVKDLTVNMFEGQITVLLGHNGAGKTTTLSMLTGLFPPSSGRAYINGYDICQDMVLI
RHSLGLCPQHDVLFDNLTVQEHLLFYTQLKGYSQEKIPAEVDRIIRILNLEDKRHSHSKT
LSGGMKRKLSIGIGLIGDSKVVMLDEPTSGMDPSARRATWDLLQGEKRGRTILLTTHFMD
EADLLGDRIVIMAGGELQCCGSPLFLKNKYGAGYHMVIVKDALCNVSEITRLVHMYVPNA
TLESSAGAELSYILPKESTNRFELLFAELEMNREELGIASYGASVTTMEEVFLRVGKLVD
SSLDIQAIQLPPLQYQHERRSHDWTMDDTSSYSGMTDVTDFTDSGTLISEDCSNIKLNTG
TRLYMQQFYAMFLKRALYSWRNWKVIVAQFLVPLVFTVLALVVAKTFPGRHDSPQLRLAL
GRYGPTTVPVALEPGKGPLAIALAQVYSSQLAAQQAQDVNIRDFTEYVLTKTEEEGGAFN
ERCVVGASFRGGTGKFTEVTAYFNNQGYHTAATALMMVDNTLFKMLAGPNASIMTGNMPM
PRNVSESAQSQLTEGQTGFAIAINLMYGMASLSSTFALLLVTERSLKSKHVQQVSGVYLS
NFWFSALLWDLVNFFLPCMLMLVVFRAFGVKAFVADNHLVDVLLLLLLYGWAVIPLMYLL
SFLFSTAATAYTRLTIFNIISGTATFLTVTIMTIPELYLQDLSRNLDKVFLLFPNYCLGM
SFSQFYQNYQFITFCTPNPVTMAFCRAFNITYQENYFSMSEPGVGRFLVALSLQGVVFIT
LLFIIEMQCVKTLRRFLTHLASRRKQLPLMGDAALLPEDRDVAEERKRVLECQPIVESMV
GSPLILQDLSKVYSSGETVLAVDRLSLAVGKGECFGLLGFNGAGKTTTFKMLTGDETVTS
GDAYIDGYSILRDVKKVQQRIGYCPQFDAVLDHMTGRETLSMYARLRGIPEKYVSGCVEN
VLRSLLLEPHADKLCRSYSGGNKRKLSAAVALIGGPPVIFLDEPSTGMDPVARRLLWDAV
TRTRESGKAIIITSHSMEECEALCTRLAVMVNGQFKCLGSPQHLKSKFGSGYTLLAKVRV
DKEVEDSDLQLFKDFIESTFPGSLLTDEHQGMVHYHLTDKTLTWAQVFGTLEAAKEKYNI
DDYAVSQISLEQVFLSFAQFQHCSRK
NT seq
5121 nt
NT seq
+upstream
nt +downstream
nt
atggcgatagcacgccagtttggattactcttgtggaagaactaccttcagcagaagcgt
cagatcctggtgactcttgtagagatcgccctgcccctgctcttctcgggcatcctcatc
gtgctgcgcgagaacgtgcccttcaaggactaccccaatgccacgctctaccagagcttc
tctgtggatggcctgcagtacccactggacaactaccatcactaccagttggcctatgtg
ccgggcaacgccagtgtggtgcggcgggtggcagaggacgtgcagcacagcctggacccc
gtcatcagttcagtgcatgggtttgagacagaggagcagtttgaggactttgtgaggaag
gaccctcagtctcggaaggttctggctgctgtggtgtttgagcactccttcactcacgat
gatgagccactgccccaacaggtcagctaccacctgcggttcagctttagtccccgtaat
gccccggccaaggagaagtctgagctgaacatcaacaatgactttgactggcacaccctc
aacttgttccccctcttccaactgcccgggcccagggagcagtacgacctccaggggggc
acgcctggttatttccgcgagggtttcctggcagtgcagcatgcggtcaaccaggccatc
atgcgttcctataacagcacaggagcagcctggctcctctcccacacccgggtggtcctc
cgccgattccccttcccgccgttcatctacgacgtgttcatcctggccatccagaaccag
ctgcccctcctcctggtgctgagcctcacctatacctctctgaacatcgtgagggccgtg
gtgcaggagaaggagaggaagctcaaggagtacatgcggatgatgggcctcagtaactgg
ctgcactggacggcctggttcctcatgttcttcctcttcctcgccatctccatgttcttc
gtcacgctgctcttctgcatcaaggtgagccctaatggagctgtgttgacctatagtgac
cccaccctggtctttgtcttcctgcttgtctttgccgtggcaaccatcaacttcagcttc
atgatcagtgccttcttctcaagagccaatgtggcggcggcggcgggcggcttcatctac
ttcctgtcctacctgccgtacgtgttcctatggcctcgctacgacctgcttagccacgcc
cagaaggtgtctgcctgcctcatctccaatgtggccatggccatgggagcgcagctacta
ggcatgtttgagggcaaaggcacggggatccagtggtgtaacctgtttgagtcggtgacg
gtggacgatgacttctccctggcccaggtgctggggctgctgctgctggatgccctgctc
tatggcctggtggcctggtacgtggaggctgtgttcccaggggagtacggagtccctctg
ccctgctacttcttcctactgccgtcctactggtgcagcagcccccgcatggccatggtg
aaggaagaggaagacgtggagaaggctctgaagggagagttcatcgaggaggagccagcc
ggactggtctcaggagtcaagatcaaacacctgaacaaggagttcaaagtgggtaacaag
acgcggcaggctgtcaaggatctgacagtgaacatgttcgagggccagatcacagttctg
ctggggcacaacggagccgggaagaccaccacactgtccatgctgacaggtctgtttcct
cccagcagtggcagggcctacattaacggctatgacatctgtcaggacatggttctgatt
cgccacagcctgggcctgtgtccgcagcacgacgtgctctttgacaacctcactgtccag
gagcacctgctattctacacacagctgaaggggtattcccaggagaagattccagctgag
gtggaccggatcatcaggattctgaacctggaggacaagcgacattcccactccaagacc
ctgtcaggtgggatgaagaggaaactatccattggcatcggcctcatcggagactccaag
gtggtgatgttggatgagcccacgtcgggcatggacccgtcggcgaggcgggccacctgg
gacctgctccagggtgagaagcgcgggcgcaccatcctgctgactacacactttatggac
gaggccgacctgctgggggaccgtatagtcatcatggctgggggagagctgcagtgctgc
ggctcgcctctgtttctcaagaacaaatatggtgctggctaccacatggtgatcgtgaag
gatgcgctgtgcaacgtgtctgagatcacacgtctggtccacatgtacgttcccaatgcc
acgctggagagcagtgctggggctgagctctcatacattctgcccaaagagagcaccaac
cggtttgagctgctgtttgcagagctggagatgaacagagaggagctgggcatcgccagc
tatggagcctctgtcaccaccatggaggaggtcttcctcagagtggggaagctggtggat
tctagcctggacatccaggccatccagctgcccccgctgcagtaccaacacgagagacgc
tcccatgactggaccatggacgacaccagcagctacagcggcatgacggacgtcaccgac
ttcactgacagcggcacgctcatctccgaggactgctccaacatcaagctcaacaccggg
accagactgtacatgcagcagttctatgccatgttcctgaagcgggcgctctatagctgg
aggaactggaaggtgattgtggcccagttcctggtgcccctggtgttcaccgtgctggcc
ctggtggtggcaaagaccttccccgggcgccacgactcaccgcagctgaggctggcactg
ggccgctatggccccaccaccgtgcccgtggccctggagcccggcaagggaccgctggca
atcgccctggcacaggtgtattcttcacaattggccgcccagcaagcccaggacgtcaat
attagggacttcacggagtacgtgctcaccaagaccgaggaggagggtggggcattcaac
gagcgctgcgtggtgggtgcatcattcagaggcggcacggggaagtttaccgaggtcacg
gcctacttcaataaccagggctaccacacggccgctacagccctgatgatggtggacaac
accctgttcaaaatgctggccgggcccaacgcatcgattatgacgggaaacatgcccatg
ccccgcaacgtctccgagagcgcccagagtcagctgacagaaggtcagacaggctttgcc
atcgccatcaacctgatgtatggcatggcatccctgtccagtaccttcgccctgctcctg
gtcacagagcgttcactcaagtccaagcacgtacagcaggtcagcggcgtctacctctcc
aacttctggttctctgcactgctctgggacctggtcaacttcttcctgccctgcatgctc
atgctggtggtgttccgggcgtttggggtcaaggccttcgtagcagacaaccacctggtt
gacgtgttattactcctgctgctatatggctgggccgtcatccccctcatgtacctgctc
agcttcctgttctccaccgctgccaccgcctacacccgcctcaccatcttcaacatcatc
agcggcaccgccaccttcctcaccgtcaccatcatgaccatcccagagctatatctacag
gacctgtctcgtaacctggacaaggtgttcctgctcttccctaactactgcctgggcatg
tccttcagccagttctaccagaactaccagttcatcaccttctgcacccccaaccccgtg
accatggccttctgccgtgccttcaacatcacgtaccaggagaactacttctccatgtcg
gagccgggggtggggcgtttcctggtggccctgtccctgcagggtgtagtcttcatcacc
ctcctcttcatcatcgagatgcagtgtgtcaaaaccctccgccgcttcctcacccacctc
gccagcagacgtaaacagttgcctctgatgggggatgcggccctactgccggaggacagg
gacgtagcggaggagaggaagagggttctggagtgtcagcccatagtagaatctatggtg
gggagcccactcattctgcaggacctcagcaaggtatacagcagtggagaaacagtactg
gcggtagacagactctctctagcagtggggaaaggagagtgttttggcctgctgggtttc
aatggagcagggaagaccaccaccttcaagatgctcaccggggacgagactgtcacctct
ggcgatgcctacattgacggctacagcattctgagggatgtcaagaaggtacagcagcgg
attggctattgcccgcagttcgacgctgtcctggatcacatgacaggaagagaaacgctg
agcatgtatgctaggctccgggggataccagagaaatacgtgtcaggctgcgtggagaac
gtgctacgatccttactactggagccccatgctgacaaactgtgccgcagctacagtggg
ggcaataagaggaagctgagtgcggctgtggctctgattggtggacccccggtcatcttc
ctggacgagccgtccactggcatggacccggttgctaggcgactgctgtgggatgctgtg
acgcgcacccgagagtctggaaaggccatcatcatcacctctcacagtatggaggaatgc
gaggccctgtgtacccggctggctgtgatggtgaacggtcagtttaagtgtctgggcagt
ccccagcacctgaagagtaagtttggcagcggctacacactactggctaaagtacgagtg
gacaaggaggtggaggatagcgacctgcaactcttcaaggacttcatcgagagcaccttc
ccaggaagtctactaacagatgaacaccagggcatggtgcactatcacttaactgacaag
acacttacctgggcacaggtgtttggcaccctggaggcagccaaagagaagtacaacatc
gacgactacgctgtgagccagatctccttggagcaggtgttcctcagcttcgcccagttc
cagcactgcagcaggaaatag
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integrated database retrieval system
