Oncorhynchus mykiss (rainbow trout): 110485273
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Entry
110485273 CDS
T07259
Name
(RefSeq) Usher syndrome type-1G protein homolog
KO
K21878
Usher syndrome type-1G protein
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
omy03037
]
110485273
Cilium and associated proteins [BR:
omy03037
]
Primary cilia and associated proteins
USH complex and associated proteins
110485273
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Paralog
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GFIT
Motif
Pfam:
Ank_4
Ank_2
Ank
Ank_3
Ank_5
SAM_1
Motif
Other DBs
NCBI-GeneID:
110485273
NCBI-ProteinID:
XP_036795108
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Position
12:92969151..93000050
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AA seq
484 aa
AA seq
DB search
MNDRYHKAARDGYLDLLKEATRKDLNAPDEDGMTPTLWAAYHGNLEALRLIVGRGGNPDK
CDIWGNTPLHLAAANGHHNCLSFLVSFGANMWCLDNDYHTPLDMAATKSHMDCVRYLDSI
AAKQSALNPKLVGKLKERAFREAERRIKECVKLQRKHHKRMERKFHKEAASEQSMSDAMS
FTSYTSSSVSRKLHHLNTTTVSVPYSQATLHATTRGKTKIQKRLEKRKQGDGTFKIYEDG
RKSVRSLSGLQLGNDVMFLKQGTYVGPRDRAGRRGNLRDIFHGDANDDTISRAISEPDLS
YRPDMEYSEVSTDSGHDSLFNRPGLGTMVFRRNYISGGLFGIGGRDEGSLSGGTERAGST
NVRLRSRLRRSPSLDDGGDSIGSASSLRERNRQELPWDELELGLDDDFEAVTSPLEVFLA
AQTMGEFLTVFRREKIDLEALLLCSDQDLKSIHIPLGPRKKILDACKRRLETLEDPDYIE
DTLL
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgaatgacaggtatcacaaggcggcccgggatggctacctggacctgctgaaggaggct
acgcggaaggacttgaacgcgccggatgaagatggcatgacaccgacgttatgggccgct
tatcatggcaacttggaggctctgcgacttatcgtgggcagaggaggcaaccctgataag
tgtgacatatgggggaacacacctctccacctggcggccgccaacggccaccacaactgc
ctgtccttcctggtgtccttcggtgccaacatgtggtgcttggacaacgactaccacacg
cccctggacatggccgccaccaaaagccacatggactgtgtccgctacctggactccatc
gccgccaagcagtcggccctcaaccccaagctggtggggaagctgaaggagcgggctttc
cgcgaggccgagaggaggattaaggagtgtgtgaagctgcagcggaagcaccacaagcgt
atggagcgcaagttccacaaagaggcagcgtcggagcagtccatgtcagacgccatgagc
ttcaccagctacacaagcagctcagtgagccgcaagctgcaccacctaaacaccaccact
gtcagtgtgccatactctcaggctactcttcacgccacaacccgaggcaagaccaagatc
cagaagaggttggagaagaggaagcaaggggacgggaccttcaagatctacgaggacggc
aggaagagcgtgcgctccctctcgggccttcagctgggcaacgatgtcatgttccttaaa
cagggaacctatgtcggccctcgggaccgcgcagggcgccgcggcaacctccgagacata
ttccacggagacgccaacgacgacaccatctctcgtgccatcagcgagccggacttgtct
taccggcccgacatggaatactctgaggtcagcaccgactcgggccacgactctctcttc
aaccggcccggtctgggaaccatggtgttccgacgcaactatatcagcggtggcctgttc
ggcatcggcgggcgtgacgaggggagcctcagcggaggaaccgaacgggctggcagcacc
aacgtgcggctgcgcagccggctgcggcgttcgcccagcctggacgatgggggggacagc
atcggcagtgccagcagcctccgggaaaggaaccgccaggagcttccctgggacgagctg
gagctggggctggatgatgacttcgaggccgtgaccagcccgttggaggtgttcttggct
gcgcagaccatgggcgagttcctcaccgtcttcaggcgggagaagattgacctggaggcg
ctgctgctgtgctcggaccaggacctcaagagcatccacatccccctgggacccaggaag
aaaatcctagatgcctgcaagagacgtctggagacccttgaggaccctgactacatcgag
gacaccctgctgtga
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