Oncorhynchus mykiss (rainbow trout): 110485623
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Entry
110485623 CDS
T07259
Name
(RefSeq) leucine-rich repeat protein SHOC-2
KO
K19613
leucine-rich repeat protein SHOC2
Organism
omy
Oncorhynchus mykiss (rainbow trout)
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_1
LRR_9
LRR_5
Motif
Other DBs
NCBI-GeneID:
110485623
NCBI-ProteinID:
XP_036805151
Ensembl:
ENSOMYG00000009051
LinkDB
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Position
17:20026043..20057092
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AA seq
585 aa
AA seq
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MSSTLGNKDKDWKEKDLKGGPTGGKEREKEAKALAGLGGKDCGKDPKAKGKDAKEGKKDA
GSASPAVAFSVDNTIKRPNPAPGTRKKSSNAEVIKELNKCREENSMRLDLSKRSIHMLPT
SIKELTQLAELYLYSNKLQSLPSEVGCLSGLVTLALSENSLTSLPESLDSLKKLRMLDLR
HNKLREIPAVVYRVTSLTTLYLRFNRITAVERDIRNLAKLTMLSIRENKIKQLPAEIGEL
CNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPETIGNLASINRLGLRYNRLS
AIPRSLAKCRELEELNLENNNISVLPEGLLSSLVNLTSLTLARNCFQSYPVGGPSQFSTI
YSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKI
PEDICGLISLEVLILSNNLLKKLPHGIGNLRKLRELDLEENKLESLPNEIAYLKDLQKLV
LTNNQLTTLPRGIGHLTNLTHLGLGENLLQHLPEEIGTLENLEELYLNDNPNLHSLPFEL
ALCSKLSIMSIENCPLSHLPPQIVAGGPSFIIQFLKMQGPYRAMV
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atgagtagtactttaggtaacaaagacaaagactggaaagagaaggacctgaaaggaggt
ccgacaggagggaaagaaagggaaaaagaggccaaggctctggctggtttaggcggcaaa
gattgcggcaaggatcccaaggccaaagggaaagacgccaaagaaggaaagaaggatgca
ggttccgcgtcgcctgccgtcgccttctccgtggacaacacgataaagaggcccaacccg
gcgccggggacacgcaagaagtccagcaacgccgaggtgatcaaagagctcaacaagtgc
cgtgaggagaactccatgcgtctggacctgtccaagcgttccatccacatgttacccacc
tccatcaaggaactcacccagctggcagagctctacctttacagcaacaagctccagagc
ctcccctcagaagtgggctgcctgtctggcctggtcaccttagccctgagtgagaactct
ctaaccagcctcccagagtccttggactccctgaagaagttgaggatgctggacctgagg
cataacaaactgagggagataccggcggtggtttaccgggtgacgtcgctgaccacactg
tacctgaggttcaaccggatcacggcggtagagagggacatccggaacctggcgaagttg
accatgctcagcatccgtgagaacaagatcaaacagctgcctgccgagataggggagctc
tgtaacctcatcaccctggacgtagcccataaccagctggaacatctacccaaggagatc
ggcaactgcacccagatcaccaacctggacctacagcacaacgagctactggacctacca
gaaactataggtaacttggcaagcataaaccgcttgggtctgcggtacaacaggttgtca
gccatccccagatcgctagccaagtgcagagaactggaagagctcaacctagaaaacaac
aacatctccgtgttaccagaaggtctcctgtctagtctggtgaatctgaccagtctaacc
ctggcgaggaactgtttccagtcctacccggtgggaggaccctcccagttctccaccatc
tactctctcaacatggagcacaaccgcatcaacaagatcccctttggaatcttctccagg
gccaaagtcctcagcaaactcaacatgaaggacaaccagttgacgtctctgcctctagac
tttggcacgtggaccagtatggtggagctcaacctggccaccaatcagttgacaaagatc
cctgaggacatctgcggtctcatttcgcttgaggtcttgatattgtccaacaatcttctc
aagaagttgccacatggtattggcaacctgaggaaactacgggagctcgacttggaggag
aacaagctggaatcgctcccgaatgaaatcgcttacctgaaagatttacagaaactagtg
ttgaccaataatcagctgaccacgttgccccgtgggatcggtcacctcaccaacctgacc
cacctgggtctgggagagaacctgctgcagcacctgccagaggagatcggtacactggag
aacttggaggagctgtacctcaatgacaaccccaacctgcacagcctcccgtttgagctg
gccctgtgcagcaagctgtccatcatgagcatcgagaactgtcctctcagccatctgccc
ccgcagatcgttgccgggggcccctccttcattatccaattcctcaagatgcaggggccc
taccgggccatggtctga
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