Oncorhynchus mykiss (rainbow trout): 110485789
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Entry
110485789 CDS
T07259
Name
(RefSeq) VPS10 domain-containing receptor SorCS1 isoform X1
KO
K27081
VPS10 domain-containing receptor SorCS1
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
omy04131
]
110485789
Membrane trafficking [BR:
omy04131
]
Protein recycling
Others
Others
110485789
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
PKD
PKD_4
PSII_BNR
Motif
Other DBs
NCBI-GeneID:
110485789
NCBI-ProteinID:
XP_036796331
Ensembl:
ENSOMYG00000022127
UniProt:
A0A8C7RD45
LinkDB
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Position
13:complement(17725821..17879517)
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AA seq
1288 aa
AA seq
DB search
MERGVRLCPIWHTSVFWFLLLIMLSFFLAAKSEITCRSCQPGDKGPIKELLLKTDTREFA
TGHGGEVIGNGDGTTASRSLNSASAETQQLDCAAGSDECIQGKYIYSRRIRNTDILLRPK
NALLDGGMQYGGGKQRKFTPRGEYKVSNLKMNRHVGNTDVGKARADLIPGVSHKHRVRRD
SPRANIGDVKVKSSGSPQRRETLPLSYSREGITSRTGRSRVTRSELRWSNEDRRAASSRQ
DELKLTSSTFALTGDSAHNQAMVHWSGQNSSVILMLTKLFDFNLNSVTESSLWRSTDYGT
TYQKLNEKVGAKTILSYLYVSPNNKRKIMLLTDPEVESSLLISSDEGATYQKYRLSFYIL
SLLFHPEQEDWILAYSHDQKLYSSVEFGRRWQLVHERVAPNRFYWSKTGLDKEPGLIHLE
TIISEGQAQYVTCKLQNCTEANKGKPFPGYIDPNSLVVQDEYVFVQVSTGGRPIYYVSAK
REVFTPMKLPKYTLPKDLHVISTDENRVVAAVQEWNQNDTYNLYVSETGGVFYTLALENV
VSSMGHEGNVMIDLYEVAGIKGMFLANKKTDNVVKTYITYNRGRDWRLLQAPTADLRGNS
IRCELPYCSLHLHLHVSANPYTSGNIESKDSAPGIIVASGSIGAELTTSNVSMFITSDAG
NTWRQIFDEEYSVLYLDQGGALVAIRHTPLPIRHLWMSFDEGREWNKYSFTMSPLFVDGL
LGEPGEETLIMTIFGHVSHRSEWQLVKIDFRSIFNRRCTEGDYQTWHLHNRGEPCIMGVK
RIYRKLKPIARCVMGKTYSVTMTSAPCDCTEADFECDYGYDRRSDGKCTPAFWFLPSSMS
RSCTTGTTFINSTGYRKVVSNNCTAGVIAEYTARRQHCPTQAPKGLHLVTSEGKLTATLG
TNVTFLVFLEEGDGARTSIMVDFGDGHALTYSNVSSIENGVKHVYKAVGIYRVSATGENR
LGSESVVLYLHVTCQLEYIHLSAPFVAVKSKEVNLTAVLWPSQVGTVTYIWWFGNNTEPI
ITLEGSVACTFSREGVNTVTVQVSAGNAILQDRKAIAVHEYFRSHLLAFSSNLDDHNPDV
AEWRLDVSRVIKNSMVKATGVTPERLLVSVLPGLPTAAEFFLLPDKELTEGKPDKNSAHL
DQLTEIILSALNQNLVQFTLRPGVQVTVYAAHLSAAPLVDMSENHSGSAMLMLLSVVVLG
LAIFVVYKFKRKIPGLNVYAQMQNEKEQEMILSPVSPTESTLVSPNTPRELVTSPELMDT
ELNTRPIGCIKSHAHVKFSTELPTYINI
NT seq
3867 nt
NT seq
+upstream
nt +downstream
nt
atggagaggggggtcagattatgccctatttggcacaccagcgttttctggtttctgctt
ttgataatgctatctttctttttagccgctaaatcagagataacttgcagatcatgtcag
ccgggggataaggggcctattaaggaattactgcttaaaacggacacacgagaattcgca
acagggcacggaggggaagttattggaaatggagacgggacaactgcttcacggagttta
aattctgcaagtgccgaaactcaacagcttgattgcgcagctggatccgatgaatgcatc
caggggaaatacatatactcaaggcgaatacggaatactgacatactgctccgtcccaag
aacgcactactcgatggaggaatgcaatacggtggtggtaaacagagaaaattcaccccg
cgcggtgagtacaaagtttccaacctgaaaatgaaccgtcatgtaggtaatacagatgtc
gggaaggctcgcgcagatttaattcccggcgtctcacacaagcacagagttcgtagggac
agcccgagagctaatattggggatgttaaagtgaagtcctccggctcaccccagagaagg
gagacactgcctctgagttactcgcgagagggcatcacctcacggactgggcgcagcaga
gtgacacggtccgaattgcgatggagcaacgaggacagaagagcggccagttcgaggcag
gacgaactcaaactcaccagttcaaccttcgcattgaccggagattccgcacacaaccaa
gccatggtgcactggtctgggcaaaatagcagtgtgattctcatgctgacaaagctgttt
gacttcaacctgaacagtgtcacggagagctcgttgtggaggtcaaccgactacggaacc
acttaccagaagctcaatgagaaagtgggggcgaaaacaatcctcagctacttgtacgtc
agtcccaacaacaagagaaagatcatgcttctgactgacccggaggtggaaagcagcctg
ctgatcagctccgatgagggagccacctatcagaagtaccgcctcagcttctacatcctc
agccttctcttccaccccgagcaggaggactggatccttgcctacagccatgaccagaag
ctgtacagctcggtggagtttggaaggaggtggcaacttgtccatgagagggtggccccc
aatcgattctactggtcgaaaacgggtttagacaaagaaccgggcttaattcacctggaa
accatcatctctgaaggacaggcgcagtacgtcacctgcaagctgcagaactgcaccgag
gccaataagggcaagccgttccctggctacattgaccccaattcccttgtggtgcaagac
gagtatgtgtttgtccaggtgtcaactggtgggcgtccaatctactatgtgtcagccaag
cgggaagtcttcacacccatgaagctacccaagtacaccttgcctaaggatctgcatgtg
atcagtacggatgagaaccgggtggttgcggcggtgcaggagtggaaccagaacgacacc
tacaacctgtacgtgtcagagactggaggggtcttctacaccctggccctggagaacgta
gtcagcagcatggggcacgagggcaacgtcatgatagacctgtacgaggtggcgggaata
aaagggatgttcctcgccaacaagaagacggacaacgtggtgaagacttacatcacctac
aacagagggagagactggaggctcctgcaggctcccactgctgacctgaggggcaacagc
atccgctgtgaactaccatactgttccctacacctccacctacatgtgtcggccaacccc
tacacgtcggggaatatcgagagcaaggactctgccccggggatcattgtggcctcaggc
tccatcggagcggagttgaccaccagcaacgtgagcatgttcatcacctcggacgccggc
aacacgtggagacagatctttgatgaggagtacagtgttctctacctggaccaaggaggg
gccctggtggctataagacacactccactccccatccgacacctatggatgagtttcgac
gaggggagagagtggaataaatacagtttcaccatgtcgcccctgtttgtggacgggttg
ctaggggagccgggggaggagactctcattatgacgatctttggccacgtcagtcaccgg
tccgagtggcagctggtcaagattgacttcaggtccatcttcaaccggagatgtacagag
ggggattaccagacatggcacctacacaaccggggcgaaccgtgcatcatgggagtgaaa
agaatctacaggaagttgaagcccatagccaggtgcgttatgggtaagacgtactcggtc
acgatgacctcggcgccctgcgactgcacagaggccgactttgagtgtgactatggctac
gataggcggagtgacggcaagtgcacccccgccttttggttcctcccatcgtccatgtct
agaagctgcaccacagggactactttcatcaacagcactggctacaggaaggttgtgtcc
aataactgcacagcgggagtgatagcagagtacacggccaggaggcagcactgtcctacc
caggcccccaaaggcctgcacctcgtcaccagtgaaggaaagctgacagctactctgggc
accaatgtcaccttcctggtgtttcttgaagagggcgatggagccaggacgagcatcatg
gtggacttcggggacggtcacgctctgacctactccaacgtgagctccatagagaatggg
gtcaagcacgtctacaaggctgtggggatctaccgtgtgtccgctacaggagagaacagg
ctggggtcggagagtgtggtgctgtacctccacgtcacatgtcagctggagtatatccat
ctctccgctccctttgtggcggtgaagagtaaggaagtcaacctcactgctgtgctgtgg
ccgagccaagtgggaacagtcacctacatctggtggttcggaaataacactgagccgata
atcaccctggaagggagcgtggcgtgcacgttctcccgggaaggcgtcaacactgtcacc
gtgcaggtgtccgctgggaacgccatcctgcaggatcggaaagccatcgctgtccacgaa
tatttcaggtcacatctactagccttctcatctaacctggatgaccacaaccccgatgtg
gccgaatggagactagacgtcagcagagtcatcaagaactccatggtcaaagccacaggg
gtgacaccggaacggctccttgtcagtgtcctaccagggttgcccacggcagcagagttt
ttcctcctgccagacaaagagttaacggagggaaagccggataagaactcagctcattta
gaccagctcactgaaatcatacttagcgccctcaaccaaaacctggtccagttcaccctt
cggcctggggtccaggtcacagtatatgctgcacatttgtcagccgcgcccctagtggac
atgagtgagaaccacagcggctcggccatgctgatgctgctgtcggttgtggttctgggt
ttggcgatatttgtcgtctacaaattcaaaaggaagatcccaggcctcaacgtctatgcg
cagatgcagaacgaaaaagaacaagaaatgatcctgagtccagtaagtccgacggaaagc
accctggtgtccccgaacactccgagggagctggtgacttctccggagcttatggacaca
gagttgaacacacggcccatcggatgcatcaaatctcacgcacatgtcaagttctcaacg
gaactccccacgtacatcaacatttaa
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