Oncorhynchus mykiss (rainbow trout): 110485797
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Entry
110485797 CDS
T07259
Name
(RefSeq) intraflagellar transport protein 56 isoform X1
KO
K19685
intraflagellar transport protein 56
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
omy03037
]
110485797
Cilium and associated proteins [BR:
omy03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
110485797
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_19
ANAPC3
TPR_16
TPR_2
TPR_1
TPR_14
TPR_8
TPR_6
TPR_9
Coatomer_E
SRP_TPR_like
Motif
Other DBs
NCBI-GeneID:
110485797
NCBI-ProteinID:
XP_021412644
Ensembl:
ENSOMYG00000031756
LinkDB
All DBs
Position
13:18225172..18235534
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AA seq
558 aa
AA seq
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MILSRVKPAVGGDSAASVSEKKKKNKAKKSPRLEEYLNQRDYLGAQTLLEFQRDVGEKEE
HADLWIGYCAFHLGDYKRAMEEYRALTLRLEEPGEVWVYLACTQFFLGLYREAEEAANKA
PKCALQNRLLFHLAHKFNDEKKLMGFHQNLEDVTEDQLSLASIHYMRSHYQEAIDIYKRI
LLQNRDFLALNVYVALCYYKLDYYDVSQEVLAVYLQSIPESTIALNLKACNHFRLYNGKA
AEAELKNLIDISSCSFEFAKELIRHNLVVFRGGEGALQVLPPLIDVISEARLNLVIYYLR
QDDVQEAYTLIKDLEPTTPQEYILKGVVNAALGQEIGSRDHLKIAQQFFQLVGGSASECD
TIPGRQCMASCFFLLRQFEDVLIYLNSVKSYFYTEDMFNFNYAQAKAALGNYKEAEEIFL
LIQGEKMKTDYVYLSWLTRCYIMNQKGRLAWELYLKMGASPDSFSLLQLIANDCYKMGQF
YWAAKAFDTLEKLDPDSNYWEGKRGACVGIFQLILAGREPKETLKEVLPLLRSTQNPQVE
YIIRALRKWAKDNRVPLT
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atgattctgtctcgggtgaaaccagcagtaggtggagattctgcagctagtgtcagtgag
aagaagaagaaaaacaaagccaagaagagccctcgcctggaggaatacctcaaccagaga
gactaccttggggcacaaactctgttagagtttcagcgagatgttggagaaaaagaggag
catgcagacctttggattggctactgtgcctttcacttgggtgattacaagagagcaatg
gaggagtacagggccttgacactcaggttagaagaaccaggggaggtgtgggtgtatctg
gcctgcactcagtttttcctggggctctacagagaggcagaggaggctgcaaacaaggct
ccaaagtgtgcacttcagaatcgcctgctcttccacttggctcataagttcaacgatgag
aagaagctgatgggtttccaccagaacctggaggatgtgactgaggaccagctgagcctg
gcctccatccactacatgaggtcacactaccaggaggccatcgacatctacaaacgcatc
ctgctacagaatagagatttcctggctcttaacgtgtacgtagcgctgtgctactacaag
ttggactactatgatgtttcccaagaggtgttggctgtgtatctgcagagcattcctgaa
tccaccatcgctctcaacctcaaggcctgcaaccacttcaggctgtacaacggcaaggcc
gccgaggctgagttaaagaaccttatagacatctcctcctgctcctttgagtttgctaag
gagcttatccggcataacctggtggtgtttcgtggtggggagggtgcgttgcaggtgcta
cccccattgattgatgtcatctctgaggctcgattgaacctggtcatctactacctcaga
caagatgatgttcaagaggcttacaccctcataaaagacttggagccaaccacaccacag
gagtacattttgaaaggagtagtgaatgctgctttgggtcaagaaattggatcgagggat
cacctgaagatcgctcaacagttcttccagctggtcggaggctcagccagcgaatgcgac
acgatacctggaagacagtgtatggcttcctgtttcttccttctgaggcagtttgaagac
gttctcatctacctcaactcagtcaagagttacttctataccgaggatatgttcaatttc
aactatgcccaggccaaagctgccttgggcaactacaaagaagcagaggagatatttctg
ctgatccagggtgagaagatgaagactgactatgtatacctgagctggctgactcgctgc
tacatcatgaaccagaaaggccggctagcctgggagctgtatctgaagatgggggcttcg
ccagactccttcagcctcctacaactcattgccaacgactgctataagatgggtcagttc
tactgggcagccaaagcattcgatactctggagaaactggatcccgactccaactactgg
gagggcaagagaggggcctgtgtcggaatcttccagctcattctggcaggcagagagcca
aaggaaaccttgaaggaggtgctgcccctgttgaggagcacacagaacccccaggtggag
tacattatcagagctctgaggaaatgggccaaagacaacagggttcctctgacatag
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