Oncorhynchus mykiss (rainbow trout): 110485804
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Entry
110485804 CDS
T07259
Symbol
ntn1a
Name
(RefSeq) netrin-1 isoform X1
KO
K06843
netrin 1
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
110485804 (ntn1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
omy00536
]
110485804 (ntn1a)
Glycosaminoglycan binding proteins [BR:
omy00536
]
Heparan sulfate / Heparin
Axon guidance molecules
110485804 (ntn1a)
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Motif
Pfam:
Laminin_N
NTR
EGF_laminin
EGF_LMN_ATRN
BNR_6
Motif
Other DBs
NCBI-GeneID:
110485804
NCBI-ProteinID:
XP_036796366
Ensembl:
ENSOMYG00000033127
UniProt:
A0A8C7STY5
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Position
13:18471857..18569139
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AA seq
603 aa
AA seq
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MLRILDTVVTVVTISFVVEGVLGGYGASMFAAQTSPPDPCYDENGNPRRCIPDFVNSAFG
KEVRTSSTCGKTPGRYCLVTEKGDERNRNCHTCDASDPKKYHPPTYLTDLNNPHNLTCWQ
SENYIQYPQNVTITLSLGKKFEVTYVSLQFCSPRPESMAIFKSMDYGKSWVPFQYYSAQC
RKMYTKPSKATITKQNEQEAICTDSHTDMHPLSGGLIAFSTLDGRPSAHDFDNSPVLQDW
VTATDIKVTFSRLHTFGDENEDDSELARDSYFYAVSDLQVGGRCKCNGHASRCVKDRDGN
LVCECKHNTAGPECDRCKPFHYDRPWQRATAREANECVACNCNLHARRCRFNMELYKLSG
RKSGGVCLNCRHNTAGRHCHYCKEGYYRDLSKTISHRKACKACDCHPVGAAGKTCNQTTG
QCPCKDGVTGITCNRCAKGYQQSRSPIAPCIKIPVVPPTTTASSTEKPADCDSYCKASKG
KLKINMKKYCKKDYAVQVHILKADKAGEWWKFTVNIISVYKQGESRIRRGDQFLWVRAKD
VACKCPKIKTGKKYLLLGNNEDSPGQSGVVADKGSLVIQWRDTWARRLRKFQQREKKGKC
KKA
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atgctaaggattttggataccgtggtcactgtcgtgaccatttcctttgtggtagagggg
gtgctcggtggctatggggcgagcatgttcgccgcgcaaacatcccccccggacccttgc
tacgacgagaacggtaacccgaggagatgcatccccgattttgtgaactctgctttcgga
aaggaagtccgcacttccagcacctgtggtaaaaccccgggtaggtactgtttggtaaca
gagaagggcgatgagagaaataggaactgccatacttgcgatgcctcggaccccaaaaag
tatcacccaccgacatatctaacggatctcaacaacccccataatctcacatgttggcaa
tcggaaaattacatccaatacccccaaaacgtcaccataacactgtcactgggcaagaaa
ttcgaagtcacctacgtaagcctgcagttctgctcacctcgacccgaatctatggctatc
ttcaagtctatggactacggcaaatcttgggtacctttccaatactattcggcccagtgc
aggaaaatgtacaccaaaccgagcaaggccaccattaccaaacagaacgaacaagaggcg
atatgcacggactcccacacggacatgcaccctctatccggcggtctcattgccttcagc
actctggacggcagaccgtcggcgcacgacttcgacaactcgccggtgctccaggactgg
gtcaccgccacggatatcaaggtgacgttcagccgattgcacactttcggtgatgagaac
gaggatgactcggagctagcccgggactcttatttctatgcggtgtccgatctgcaagtt
ggcggtcgatgcaaatgcaatggccacgcttcgcggtgcgtaaaagacagggatggaaac
cttgtttgtgagtgcaaacataataccgcgggaccggagtgcgacaggtgcaagcctttc
cattatgatcggccgtggcaacgcgcaacagctagagaagccaacgaatgtgtcgcctgt
aactgtaacctgcatgccaggcgatgccgtttcaacatggagctgtacaagttgtctggg
aggaagagcggaggagtctgtctcaactgtcgccacaacacggccggacgccactgtcac
tactgcaaggagggttactacagagacctgtccaaaaccatctctcacaggaaagcctgc
aaagcatgtgattgccatcccgtgggtgctgctggcaaaacctgtaaccaaaccacaggt
caatgtccctgtaaagacggcgtgactggtatcacgtgcaaccgctgcgctaaaggctac
cagcagagccgctcgcccattgccccctgcataaagattcccgttgttcccccgacaacc
acagccagcagtacagagaagccagcagactgcgactcctattgcaaggcgtcgaaaggc
aaactgaagatcaacatgaagaaatactgcaagaaagattacgctgtccaggtgcacatt
ctgaaggcggacaaggcgggcgagtggtggaagttcaccgtcaacatcatctctgtctac
aagcagggcgagagccgcatccgccgtggcgaccagttcctgtgggtcagggccaaggat
gtggcgtgcaagtgtccaaagatcaagaccgggaagaagtacctgctcctgggtaacaat
gaggattctccagggcagtctggagtggtggccgataagggctccctggtcatccagtgg
agagacacatgggcccgtcggctgaggaagttccagcaacgtgagaagaaaggcaagtgc
aagaaggcatag
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