KEGG   Oncorhynchus mykiss (rainbow trout): 110485804
Entry
110485804         CDS       T07259                                 
Symbol
ntn1a
Name
(RefSeq) netrin-1 isoform X1
  KO
K06843  netrin 1
Organism
omy  Oncorhynchus mykiss (rainbow trout)
Pathway
omy04517  IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:omy00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04517 IgSF CAM signaling
    110485804 (ntn1a)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00536 Glycosaminoglycan binding proteins [BR:omy00536]
    110485804 (ntn1a)
Glycosaminoglycan binding proteins [BR:omy00536]
 Heparan sulfate / Heparin
  Axon guidance molecules
   110485804 (ntn1a)
SSDB
Motif
Pfam: Laminin_N NTR EGF_laminin EGF_LMN_ATRN BNR_6
Other DBs
NCBI-GeneID: 110485804
NCBI-ProteinID: XP_036796366
Ensembl: ENSOMYG00000033127
UniProt: A0A8C7STY5
LinkDB
Position
13:18471857..18569139
AA seq 603 aa
MLRILDTVVTVVTISFVVEGVLGGYGASMFAAQTSPPDPCYDENGNPRRCIPDFVNSAFG
KEVRTSSTCGKTPGRYCLVTEKGDERNRNCHTCDASDPKKYHPPTYLTDLNNPHNLTCWQ
SENYIQYPQNVTITLSLGKKFEVTYVSLQFCSPRPESMAIFKSMDYGKSWVPFQYYSAQC
RKMYTKPSKATITKQNEQEAICTDSHTDMHPLSGGLIAFSTLDGRPSAHDFDNSPVLQDW
VTATDIKVTFSRLHTFGDENEDDSELARDSYFYAVSDLQVGGRCKCNGHASRCVKDRDGN
LVCECKHNTAGPECDRCKPFHYDRPWQRATAREANECVACNCNLHARRCRFNMELYKLSG
RKSGGVCLNCRHNTAGRHCHYCKEGYYRDLSKTISHRKACKACDCHPVGAAGKTCNQTTG
QCPCKDGVTGITCNRCAKGYQQSRSPIAPCIKIPVVPPTTTASSTEKPADCDSYCKASKG
KLKINMKKYCKKDYAVQVHILKADKAGEWWKFTVNIISVYKQGESRIRRGDQFLWVRAKD
VACKCPKIKTGKKYLLLGNNEDSPGQSGVVADKGSLVIQWRDTWARRLRKFQQREKKGKC
KKA
NT seq 1812 nt   +upstreamnt  +downstreamnt
atgctaaggattttggataccgtggtcactgtcgtgaccatttcctttgtggtagagggg
gtgctcggtggctatggggcgagcatgttcgccgcgcaaacatcccccccggacccttgc
tacgacgagaacggtaacccgaggagatgcatccccgattttgtgaactctgctttcgga
aaggaagtccgcacttccagcacctgtggtaaaaccccgggtaggtactgtttggtaaca
gagaagggcgatgagagaaataggaactgccatacttgcgatgcctcggaccccaaaaag
tatcacccaccgacatatctaacggatctcaacaacccccataatctcacatgttggcaa
tcggaaaattacatccaatacccccaaaacgtcaccataacactgtcactgggcaagaaa
ttcgaagtcacctacgtaagcctgcagttctgctcacctcgacccgaatctatggctatc
ttcaagtctatggactacggcaaatcttgggtacctttccaatactattcggcccagtgc
aggaaaatgtacaccaaaccgagcaaggccaccattaccaaacagaacgaacaagaggcg
atatgcacggactcccacacggacatgcaccctctatccggcggtctcattgccttcagc
actctggacggcagaccgtcggcgcacgacttcgacaactcgccggtgctccaggactgg
gtcaccgccacggatatcaaggtgacgttcagccgattgcacactttcggtgatgagaac
gaggatgactcggagctagcccgggactcttatttctatgcggtgtccgatctgcaagtt
ggcggtcgatgcaaatgcaatggccacgcttcgcggtgcgtaaaagacagggatggaaac
cttgtttgtgagtgcaaacataataccgcgggaccggagtgcgacaggtgcaagcctttc
cattatgatcggccgtggcaacgcgcaacagctagagaagccaacgaatgtgtcgcctgt
aactgtaacctgcatgccaggcgatgccgtttcaacatggagctgtacaagttgtctggg
aggaagagcggaggagtctgtctcaactgtcgccacaacacggccggacgccactgtcac
tactgcaaggagggttactacagagacctgtccaaaaccatctctcacaggaaagcctgc
aaagcatgtgattgccatcccgtgggtgctgctggcaaaacctgtaaccaaaccacaggt
caatgtccctgtaaagacggcgtgactggtatcacgtgcaaccgctgcgctaaaggctac
cagcagagccgctcgcccattgccccctgcataaagattcccgttgttcccccgacaacc
acagccagcagtacagagaagccagcagactgcgactcctattgcaaggcgtcgaaaggc
aaactgaagatcaacatgaagaaatactgcaagaaagattacgctgtccaggtgcacatt
ctgaaggcggacaaggcgggcgagtggtggaagttcaccgtcaacatcatctctgtctac
aagcagggcgagagccgcatccgccgtggcgaccagttcctgtgggtcagggccaaggat
gtggcgtgcaagtgtccaaagatcaagaccgggaagaagtacctgctcctgggtaacaat
gaggattctccagggcagtctggagtggtggccgataagggctccctggtcatccagtgg
agagacacatgggcccgtcggctgaggaagttccagcaacgtgagaagaaaggcaagtgc
aagaaggcatag

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