Oncorhynchus mykiss (rainbow trout): 110485835
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Entry
110485835 CDS
T07259
Name
(RefSeq) rab11 family-interacting protein 4A isoform X1
KO
K12485
Rab11 family-interacting protein 3/4
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
110485835
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
omy04131
]
110485835
Membrane trafficking [BR:
omy04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
110485835
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RBD-FIP
EF-hand_7
EF-hand_9
EF-hand_1
Motif
Other DBs
NCBI-GeneID:
110485835
NCBI-ProteinID:
XP_021412701
Ensembl:
ENSOMYG00000034763
UniProt:
A0A8C7W5J6
LinkDB
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Position
13:complement(19495692..19584664)
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AA seq
685 aa
AA seq
DB search
MAPSALVFKSGFQPQDNKPRMESVLPDPEQLLLFLRKLKEVFDVCDEDSGGFIRVEHFVD
LGSQFGQGDEVKKLAKCLDPNAQGRINFKEFCHGVLAIKGCEGILKTTLGARSITRRPYE
TDNGYYYQRGDKALAHPVIMCTRVSVNPEPGCHLFPEGEEEGEVEGRERAELDMDSAVES
NPGSDVSEGERSGVDKEDGPGGLFFPGDKCSQLNPSVTSDLSTRSSASLNEEQFEDYGEG
EDVDYTPSSPCPEDETRTNGYSDLGSSVPSSAGQTPRKTRHLYNNEMMDVYCSQCCKKVN
LLNDLEARLKNLKANSPNRKISSTAFGRQLLHTSNFSSSNGSTEDLFRDSIDSCDIDITE
KVSYLEKKVAELENDTLMNGDLKSKLKQENTQLVHRVHELEEQLKDQEARAEQNTEEEQR
RHREAYSKMERDKNTELELLHNRVQQLEEENGDISVNMCRLKSQTEKLDEEKQRMTYKLE
DTSLRLKDEMDLYRKMMDKLRQNRHEFQKEREAMQELIEDLRRELEHLQLFKLETEKPGR
GRSSSSGLTEFNAKTREMELEHEVKRLKQRFVSQDFPLTSDLRHLVVSAGARLRHGQTEN
LKLREQNDDLNGQILSLSLYEAKNLFATQTKAQSLAAEIDNASRDDLMEALKEQEEINFR
LRQYMDKIILSILDHNPSILEIKTT
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atggcgccctctgctttggtgttcaagtcgggttttcaacctcaggacaacaaacctcgg
atggaaagtgtacttcccgacccggagcagctattgctgttcctcagaaaactcaaagag
gtgttcgacgtgtgcgacgaggattcgggtggtttcattcgcgtggagcatttcgtagac
ctcggttcacagttcggccaaggagacgaggtgaagaagttggccaaatgcttggacccc
aatgctcagggcaggatcaacttcaaggaattctgccatggagtgctggctatcaaaggc
tgtgaggggatcctgaagaccacactgggagctcgcagtatcacacggcgtccctatgag
accgacaacggttactactaccagcgtggtgacaaagcgcttgcacatccggtcatcatg
tgcacgcgggtgtccgttaaccccgagcctgggtgccatctattcccagagggagaggag
gaaggagaggtggagggcagagagagggcagagttagacatggacagtgctgtggagagc
aacccgggatcagatgtctctgaaggggagagaagcggagtagacaaggaggatggaccg
gggggacttttctttcctggagacaagtgcagtcagctaaacccatcggtgacctctgac
ctgtcgacgcgttcctctgcctctctgaacgaggagcagtttgaggactacggagaggga
gaggacgtggactacactcccagcagcccctgccccgaggacgagacgcgcaccaacggc
tactctgacctgggctcctctgtaccctccagtgctggccagaccccaaggaagacacgt
cacctgtacaacaatgagatgatggacgtgtactgttcccagtgctgtaagaaggtcaac
ctactcaacgacctggaggccaggctgaagaacctaaaagccaacagccccaataggaaa
atctccagcacagcctttggcaggcagctcctccacaccagtaacttcagcagcagcaac
ggcagcacggaggacttgttccgagacagcatcgactcctgtgacatcgacatcactgag
aaggtgagttacctagagaagaaggtagcagagttggagaatgacacgctgatgaacgga
gatctcaagtccaagctgaagcaggagaacacacagctggttcacagggtccacgagttg
gaggagcagttgaaggaccaggaggcgcgggcagagcagaacacagaggaggagcagaga
cgacaccgtgaggcctacagcaagatggagagagacaagaacactgagctagagctgcta
cacaaccgagtccaacagctagaggaggagaacggggatatatcggtgaacatgtgcaga
ctgaagtctcagacagagaaactggacgaggagaagcagcgtatgacatacaagctggag
gacaccagtctgaggctaaaggatgagatggacctctacaggaagatgatggacaagctg
aggcagaacagacacgagttccagaaggagagggaggccatgcaggagctgattgaggac
cttcgtcgggagctggagcacctgcagctgttcaagctggagacagagaagcctggccgc
ggccgcagctcctcatctgggctgacggagttcaacgccaagaccagagagatggagctg
gagcacgaggtcaagagactcaaacagcggtttgtctcgcaggactttcctctgacctct
gacctccgccacctcgtagtatccgctggggcacgcctccgtcacggtcagacggagaac
ctgaaactgagggaacagaacgacgacctgaatggtcagatcctcagtctgagtctgtat
gaggctaagaacctgtttgccacccagaccaaggcccagtcgctggctgccgagatagac
aatgcctcacgagacgacttgatggaggccctcaaggagcaggaagagatcaacttccgt
ttgcggcagtacatggacaagataattttgtctatcctggaccacaacccctccatcttg
gagatcaagaccacctag
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