KEGG   Oncorhynchus mykiss (rainbow trout): 110485929
Entry
110485929         CDS       T07259                                 
Name
(RefSeq) THO complex subunit 4
  KO
K12881  THO complex subunit 4
Organism
omy  Oncorhynchus mykiss (rainbow trout)
Pathway
omy03013  Nucleocytoplasmic transport
omy03015  mRNA surveillance pathway
omy03040  Spliceosome
omy05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:omy00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    110485929
  09122 Translation
   03013 Nucleocytoplasmic transport
    110485929
   03015 mRNA surveillance pathway
    110485929
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    110485929
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:omy03019]
    110485929
   03041 Spliceosome [BR:omy03041]
    110485929
Messenger RNA biogenesis [BR:omy03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     110485929
    TREX complex
     110485929
Spliceosome [BR:omy03041]
 Complex C
  Other components
   EJC/TREX
    110485929
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    110485929
SSDB
Motif
Pfam: RRM_1 FoP_duplication RRM_10
Other DBs
NCBI-GeneID: 110485929
NCBI-ProteinID: XP_021412843
Ensembl: ENSOMYG00000008573
UniProt: A0A8C7P4T5
LinkDB
Position
13:complement(21208771..21211696)
AA seq 273 aa
MADKMDMSLDDIIQQSKKGGGGRGNRGGRSRGSTGRGGSGGRPGGAVSGGRTGGSGPMRS
RQNFSGDRSDSRPTPYSRPRELPDKWQHDMFEGGFGGNAGGGGGAGGGGVETGGKLLVSN
LDFGVSDADIQELFAEFGTLKKAAVHYDRSGRSQGTADVHFERRADALKAMKQYNNVPLD
GRAMSIQHVTSQIRDDNQRRPSQSSNGGGGGFNRDRIGRPNFSERRGGGDRRGGRGPRGR
GRGGRGGGGKPQQLSAEELDAQLDAYNAKMETS
NT seq 822 nt   +upstreamnt  +downstreamnt
atggcggataagatggatatgtctttggatgacattattcaacaaagtaagaaaggtggc
ggtggccgcggaaatcgaggaggccgcagccgaggatcaacgggtcgaggtgggagtgga
gggcgacccggtggcgctgtctctggaggccggacaggcggatccgggcccatgaggagt
cgacagaacttcagcggagacagaagcgacagcagacccacgccatacagcaggcccaga
gagcttccggacaaatggcaacacgacatgttcgaaggtggctttggcggtaatgctggt
ggtggcgggggagcaggcggtggtggtgtagagactggcggcaagctccttgtctcaaac
cttgacttcggtgtctctgacgctgatatccaggagttgtttgcggaatttggtacattg
aagaaagcggctgtgcactatgaccggtctggccgcagccagggaaccgccgacgtccac
tttgagaggagggctgatgcactcaaagccatgaaacagtacaacaatgtacccctcgat
ggccgcgccatgagcattcagcacgtcacatcacaaatcagagacgataaccagagacga
ccttcacagagttcaaacggaggcggtggtggattcaacagagaccgaatcggacgcccc
aatttctcagaaaggcggggaggcggagacaggcggggaggcagaggccccaggggcagg
ggtagaggcggacgtggtggtggaggcaaaccgcagcagttgtctgctgaagagctggat
gcccagttggatgcttacaatgccaagatggagaccagttag

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