Oncorhynchus mykiss (rainbow trout): 110485929
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Entry
110485929 CDS
T07259
Name
(RefSeq) THO complex subunit 4
KO
K12881
THO complex subunit 4
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy03013
Nucleocytoplasmic transport
omy03015
mRNA surveillance pathway
omy03040
Spliceosome
omy05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110485929
09122 Translation
03013 Nucleocytoplasmic transport
110485929
03015 mRNA surveillance pathway
110485929
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
110485929
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
omy03019
]
110485929
03041 Spliceosome [BR:
omy03041
]
110485929
Messenger RNA biogenesis [BR:
omy03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
110485929
TREX complex
110485929
Spliceosome [BR:
omy03041
]
Complex C
Other components
EJC/TREX
110485929
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
110485929
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
FoP_duplication
RRM_10
Motif
Other DBs
NCBI-GeneID:
110485929
NCBI-ProteinID:
XP_021412843
Ensembl:
ENSOMYG00000008573
UniProt:
A0A8C7P4T5
LinkDB
All DBs
Position
13:complement(21208771..21211696)
Genome browser
AA seq
273 aa
AA seq
DB search
MADKMDMSLDDIIQQSKKGGGGRGNRGGRSRGSTGRGGSGGRPGGAVSGGRTGGSGPMRS
RQNFSGDRSDSRPTPYSRPRELPDKWQHDMFEGGFGGNAGGGGGAGGGGVETGGKLLVSN
LDFGVSDADIQELFAEFGTLKKAAVHYDRSGRSQGTADVHFERRADALKAMKQYNNVPLD
GRAMSIQHVTSQIRDDNQRRPSQSSNGGGGGFNRDRIGRPNFSERRGGGDRRGGRGPRGR
GRGGRGGGGKPQQLSAEELDAQLDAYNAKMETS
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
atggcggataagatggatatgtctttggatgacattattcaacaaagtaagaaaggtggc
ggtggccgcggaaatcgaggaggccgcagccgaggatcaacgggtcgaggtgggagtgga
gggcgacccggtggcgctgtctctggaggccggacaggcggatccgggcccatgaggagt
cgacagaacttcagcggagacagaagcgacagcagacccacgccatacagcaggcccaga
gagcttccggacaaatggcaacacgacatgttcgaaggtggctttggcggtaatgctggt
ggtggcgggggagcaggcggtggtggtgtagagactggcggcaagctccttgtctcaaac
cttgacttcggtgtctctgacgctgatatccaggagttgtttgcggaatttggtacattg
aagaaagcggctgtgcactatgaccggtctggccgcagccagggaaccgccgacgtccac
tttgagaggagggctgatgcactcaaagccatgaaacagtacaacaatgtacccctcgat
ggccgcgccatgagcattcagcacgtcacatcacaaatcagagacgataaccagagacga
ccttcacagagttcaaacggaggcggtggtggattcaacagagaccgaatcggacgcccc
aatttctcagaaaggcggggaggcggagacaggcggggaggcagaggccccaggggcagg
ggtagaggcggacgtggtggtggaggcaaaccgcagcagttgtctgctgaagagctggat
gcccagttggatgcttacaatgccaagatggagaccagttag
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integrated database retrieval system