Oncorhynchus mykiss (rainbow trout): 110485958
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Entry
110485958 CDS
T07259
Name
(RefSeq) E3 ubiquitin-protein ligase SMURF2 isoform X1
KO
K04678
E3 ubiquitin ligase SMURF1/2 [EC:
2.3.2.26
]
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04120
Ubiquitin mediated proteolysis
omy04137
Mitophagy - animal
omy04144
Endocytosis
omy04340
Hedgehog signaling pathway
omy04350
TGF-beta signaling pathway
omy04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
110485958
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
110485958
04350 TGF-beta signaling pathway
110485958
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
110485958
04137 Mitophagy - animal
110485958
09144 Cellular community - eukaryotes
04520 Adherens junction
110485958
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
omy04131
]
110485958
04121 Ubiquitin system [BR:
omy04121
]
110485958
03029 Mitochondrial biogenesis [BR:
omy03029
]
110485958
Enzymes [BR:
omy01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
110485958
Membrane trafficking [BR:
omy04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
110485958
Autophagy
Mitophagy
Other mitophagy associated proteins
110485958
Ubiquitin system [BR:
omy04121
]
Ubiquitin ligases (E3)
HECT type E3
110485958
Mitochondrial biogenesis [BR:
omy03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
110485958
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WW
C2
Motif
Other DBs
NCBI-GeneID:
110485958
NCBI-ProteinID:
XP_036796522
Ensembl:
ENSOMYG00000019807
LinkDB
All DBs
Position
13:complement(22344499..22415526)
Genome browser
AA seq
806 aa
AA seq
DB search
MSNQGVRRNGPVKLRLTVLCAKNLSKKDFFLVNTILHFGSSSTGLPDPFAKVVVDGSGQC
HSTDTVRNTLDPKWNQHYDLYIGKSDSITISVWNHKKIHKKQGAGFLGCVRLLSNAINRL
KDTGYQRLDLNKLGPNDNDTVRGQIVVSLQSRDRIGTGGPVVDCSRLFDNDLPDGWEERR
TASGRIQYLNHITRTTQWERPTRPASEYSSPSGRPLSCVVDENTPVMTPNGAAIGVLPSS
GSDARVQERRVRSQRHRNYMSRTHLHTPPDLPEGYEQRTTQQGQVYFLHTQTGVSTWHDP
RVPRDLSNVNCEELGPLPPGWEIRNTATGRVYFVDHNNRTTQFTDPRLSANLHLVLNPNP
PGPNSPGPNGPSPNGSRVAMESQSQNTNLSSRQSNQLKEQQPPPQVPALSPAQLPDEAEC
LTVPKYKRDLVQKLKILRQELSNQQPQAGHCRIEVCREEIFEESYRQVMKMRPKDLWKRL
MVKFRGEEGLDYGGVAREWLYLLSHEMLNPYYGLFQYSRDDIYTLQINPDSAVNPEHLSY
FHFVGRIMGMAVFHGHYIDGGFTLPFYKQLLGKPITLDDMESVDPDLHNSLVWILDNDIT
GVLDHTFCVEHNAYGEIIQHELKPNGKTVSVSEDTKKEYVRLYVNWRFLHGIEAQFLALQ
KGFNEVIPQHLLKSFDEKELELIVCGLGKIDIADWKSNTRLKHCTTDSNVVKWFWKAVES
YDEERRARLLQFVTGSSRVPLQGFKALQGAAGPRLFTFHQIDANTNNLPKAHTCFNRIDV
PAYEHYDKLYDKLLTAIEETCGFAVE
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atgtctaatcaaggagttaggagaaatggcccagtgaaactgcggttgacagtgctgtgt
gcgaagaacttgtcaaagaaagacttcttccttgtgaatacaatcctccattttggctcc
tcctccacagggctgcctgacccctttgccaaagtggtggtggacggctcggggcaatgc
cactccacagacaccgtaaggaacacgctggaccccaagtggaaccaacattacgacctg
tacattgggaagtctgactccatcaccatcagtgtgtggaaccacaagaagattcacaag
aagcagggggccggcttcctgggctgtgtacgccttctctccaacgccatcaaccgcctc
aaagacaccggctatcagagactggacctgaacaagctgggccccaatgacaatgacaca
gtgagaggccagatcgttgtgagtctacagtccagagaccgtatcggcacaggaggccct
gtggtggactgcagccgtctgtttgataatgatttacctgacggttgggaggagcggaga
acagcctctggtcggatccagtaccttaaccacatcacacgcaccacgcaatgggagagg
cccacccggccggcgtctgagtactccagcccctccgggcggcccctcagctgcgtggtg
gatgagaacactccggtcatgacacccaacggggcggccatcggtgtgctgcccagcagt
ggcagtgacgcgcgggtccaggagagacgcgtccgctcccagagacacaggaactacatg
agcaggacccacctccacaccccgccggacctgcccgagggatacgagcagagaaccaca
cagcagggccaggtgtacttcctccacacccagacgggcgtcagcacatggcacgacccc
cgagtgcccagggatctgagcaacgtcaactgtgaggagctgggtcctctgccgccgggc
tgggagatccgcaacacggcaacggggcgcgtctactttgtggaccacaacaaccgaacc
acgcagttcaccgacccgcgcctctccgccaacctccacctggtcctcaatccaaacccc
cctggtccaaacagccctggtccaaacggtcctagtccaaacggttcccgcgtggccatg
gagagccagagccagaacactaacctcagtagtcgtcagtcgaatcagttgaaggagcag
cagccccccccgcaggtcccggcgttgtccccggcccagctccccgatgaggcagagtgc
ctcaccgtgcccaagtacaagagggacctggtccagaagctcaagatcctccggcaggag
ctgtccaatcagcagccccaggcaggccactgtcgcatcgaggtctgccgcgaggagatc
tttgaggagtcgtaccgccaggtgatgaagatgcgtcccaaggacctgtggaagagactg
atggtcaagttcagaggagaggagggcctggactacggaggagtggccagggagtggctg
tacctgctgtcccatgagatgttgaacccctactacggcctgttccagtactccagagac
gacatctacaccctgcagatcaacccagacagcgccgtcaacccggagcacctgtcctac
ttccactttgtgggtcgtatcatgggcatggcggtgttccacggccactacatagacggg
ggcttcaccctgcccttctacaaacagctgctggggaaacccatcaccctggatgacatg
gagtcagtggacccagacctccacaacagcctggtctggatcctggacaacgacatcacg
ggggtgctggaccatacgttctgtgtggagcacaatgcctacggcgagatcatccagcac
gaactgaagcccaacggcaagactgtctctgtctccgaggacaccaagaaggagtatgtc
aggctgtatgtgaactggcgtttcctccacggcatcgaggctcagttcctggccctgcag
aagggcttcaacgaggtcatcccccagcacctgctcaagtcctttgacgagaaggaacta
gagttgatagtgtgtggcctggggaagatcgacatagcggactggaagagcaacacacgt
ctgaagcactgcaccacggacagcaacgtggtcaagtggttctggaaggccgtggagtcc
tacgacgaggagaggagggccagactgctgcagtttgttaccgggtcatctagagtccca
ctgcagggattcaaggctttacaaggtgctgcggggcccaggctcttcaccttccaccag
atcgatgccaacaccaacaatctacccaaagcccacacctgctttaaccggattgacgtt
cccgcctacgagcactatgacaagctgtacgacaagctgctgacagccatcgaggagacg
tgtggctttgcggtggaatga
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integrated database retrieval system
