Oncorhynchus mykiss (rainbow trout): 110486008
Help
Entry
110486008 CDS
T07259
Name
(RefSeq) homeobox protein OTX1 B-like isoform X1
KO
K09326
homeobox protein OTX1
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
omy03000
]
110486008
Transcription factors [BR:
omy03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
110486008
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TF_Otx
Homeodomain
CPSF73-100_C
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
110486008
NCBI-ProteinID:
XP_021412967
Ensembl:
ENSOMYG00000036609
LinkDB
All DBs
Position
13:23984759..23990432
Genome browser
AA seq
363 aa
AA seq
DB search
MMSYLKQAPYGMNGMGLSGTAMDLLHPSVGYPDRNGFEEFPLTGFYSISAHPRKQRRERT
TFTRTQLDILESLFGKTRYPDIFMREEVALKINLPESRVQVWFKNRRAKCRQQAQSGNNA
KVRPAKKKSSPTRESTGSESSGQFTPPVVTSTGSSSSSSASSGGSHPSGHGGQGLSSTST
SVTAPVSSIWSPAPISPAPAPPPVPDPTPPTSASCMQRSVSGTGGTSSYPVSYSQTAAAY
GQGYPAPASTGSYFGGVECSSYLAPMHSHHHPHHPHQLSPMTGSSMSGHPHHHIGQTSGH
HHHHHPHHHQAYSGAGLAFNSSDCLDYKEQTAAAAASSWKLNFNTTDCLDYKDQASSWRF
QVL
NT seq
1092 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcatacctcaaacaggccccgtacggcatgaacggaatggggctcagcggtacg
gccatggacctactgcacccatcagtggggtatccagatcgaaatggcttcgaagagttt
ccattgacaggtttctattccatttcagcgcatccgaggaaacagcggagagagaggaca
acttttactcgcactcagctggacattctggagtcccttttcggcaagacgcgctaccca
gacattttcatgcgggaagaagtcgcactgaaaatcaatttgcctgagtctagagtccag
gtatggttcaagaacaggagagccaagtgccgtcagcaggcccagagtggaaacaatgct
aaagtccggccggccaagaagaagtcctctccaaccagggagagcacaggctcagagagc
agtggtcagttcacccctccggtagtgaccagcaccggctcctcttcctcttcctctgcc
tcgtccggtggctctcatccctccggccatggaggccaaggcctgagcagcacttctacc
tccgtcaccgccccagtgtcctccatctggagccctgcgcccatctccccggcccccgca
ccaccccctgtccccgaccccactccccccaccagtgcctcctgcatgcagaggtctgtg
tcaggtactggaggcacgtcctcctacccggtgtcctacagccagacagcagcggcctat
gggcagggctaccccgccccagcgtcaacgggctcctacttcggaggggtggaatgcagc
tcgtacctggcccctatgcactctcaccaccacccccaccatccgcaccagctcagcccc
atgacgggctcctctatgtctggccatccacaccaccacatagggcagacctcagggcac
caccaccatcaccacccccaccaccaccaggcctacagcggggccggcctggccttcaac
tcctcagactgtctggattacaaagaacaaacggccgcggccgcagcctcttcatggaaa
ctcaacttcaacaccaccgactgcttggactacaaagaccaggcttcctcctggcgtttc
caagtcttgtga
DBGET
integrated database retrieval system
