Oncorhynchus mykiss (rainbow trout): 110486056
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Entry
110486056 CDS
T07259
Name
(RefSeq) spectrin beta chain, non-erythrocytic 1 isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04517
IgSF CAM signaling
omy04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
110486056
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
110486056
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
omy04812
]
110486056
Cytoskeleton proteins [BR:
omy04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
110486056
Intermediate filaments
Intermediate filament-binding proteins
110486056
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
CAMSAP_CH
Motif
Other DBs
NCBI-GeneID:
110486056
NCBI-ProteinID:
XP_036798256
Ensembl:
ENSOMYG00000043911
UniProt:
A0A8C7UW29
LinkDB
All DBs
Position
13:25499800..25607402
Genome browser
AA seq
2349 aa
AA seq
DB search
MTTVAAEYEHMEITQQYSSSDTVNSRWDDEWDNENSSARLFERSRIKALADEREAVQKKT
FTKWVNSHLSRVSCRITDLYRDLSDGRMLIKLLEVLSGERLPKPTRGRMRIHCLENVDKA
LQFLKEQRVHLENMGSHDIVDGNHRLTLGLIWTIILRFQIQDISVETDGDNKEKRSAKDA
LLLWCQMKTAGYPNVNIHNFSTSWRDGMAFNALIHKHRPDLIDFDKLKKSNAHHNLQNAF
NLAEQHLGLTKLLDPEDISVDHPDEKSVITYVVTYYHYFSKMKALKVEGKRIGKVLDNAI
ETEKMIEKYESLASDLLEWIEQTIIILNNRKFANSLNGVQQQLQAFNTYRTVEKPPMFTE
KGNLEVLLFTIQSKMRANNQKVYMPREGKLISDINKTWERLEKAEHERELSLRTELIRQE
KLEQLARRFDRKAAMRETWLSENQRLVSQDNFGFDLPAVDAATKKHEAIETDITAYEERV
QAVVSVAKELEAEKYHDIKRIAARKDNVIRLWEYLLELLKSRRQRLEMNLGLQRVFQEML
YIMDWMDEMKMMLLSQDYGKHLLGVEDLLQKHALVEADIGIQADRVKAVNNNAQKFAIDG
DVYKPCDPQVIRDRVAHMEFCYQELTQLAAERRARLEESHRLWKFFWEMAEEEGWIHEKE
QILSSDESGRDLTGTVRLLSQHRTLEDEMSGRAGHLQHTITEGQAMADGGHFGAAKIRER
ITNQRAQWAALEELAAVRKAHLEEAYALHQFQADADDADAWTLDALRIVSSGEVGHDEFS
TQALVRKHKDAAAEVASYRPVIDALHEQAGALPEAQVQSEQVKGRLAGIEERYKEVAELT
RFRKQALQDALALYKMFSEADACEMWINEKEQWLNSMEIPEKLEDLEVIQHRFESLEPEM
NNQASRVAVVNQIARQLMHNGHPSEKNIKAQQDKLNNRWSQFRDLADQKKESLISALGVQ
NYHLDCNETKSWIREKTKVIESTQELGNDLTGVMALQRKLTGMERDLAAIEDKLGDLRGE
AERLPGEHPNQAKAIKGRLAEITAVWEEMKATLRNREESLGEASKLQQFLRELDDFQSWL
SRTQTAVASEETPNTLAEAEKLLAQHEGIKNEIRNYEEDYQKMRDMGEMVTQGQTDAQYM
FLRQRLQALDTGWNELHKMWENRQNLLSQSHAYQLFLRDTTQAEAFLNNQEYMLAHTEMA
TTLEGAEGAIKKQEDFMTTMDANEEKINSVVEAGRRLASDGNINADRIQERAASIDDRHK
KNRKAALELLMRLKDNRALQKFLQDSQELSLWINEKMLTAQDMSYDEARNLHSKWLKHQA
FMAELQSNKEWLDKIEKDGMQLVLEKPETESVVKEKLSALQKMWEVLESTTQTKAQCLFD
ANKTELFTQSCADLDKWLGGLEGQIQSDDYGKDLTSVNILLKKQQILENQVEVRQREVVE
LQSQALVLSQEGNVTEEVDCQRHMVEHKFKELLDPLRKRKNFLVASREIHQFNRDVEDEI
LWVEERMPIATSTEHGHNLQTVQLLIKKNQTLQKEIQGHQPRFDDIFERSESLLMEDSLA
GEAIRQHLADLQQLWGLMIEETEKRHARLEQSHNAQKYYFDAAEAEAWMSEQELYMMSEE
KAKDEQSSVAMLKKHQIVEQSVEDYAETVHQLSKTSRGLTAAGHTESERIGMRQSQVDKL
YAGMKDLSEERRGKLDERFRLFQLNREVDDLEQWIAEREVVAGSHELGQDYEHVTMLQER
FREFSRDTDNIGQERVDAVNRLSDELINAGHADAATVAEWKDGLNEAWADLLELIDTRTQ
ILAASYELHKFYHDAKEILGRIMDKHKKLPEEVGRDQNTVETLQRMHTTFEHDIQALGTQ
VRQLQEDAVRLQSAYAGDKADDIQRRESEVLEAWNTLLESCDVRRGHLLDTGDKFHFFSM
VRDLMLWMEDVIRLIEAQENPRDVSSVELLMNNHQGIKAEIDARNDSFTACIELGKSLLA
RKHYASEEIKDKLLQLMDKRKDMIDKWEDRREWLRLILEVHQFGRDAGVAEAWLLGQEPY
LFGPELGQSVDEVEKLIKRHEAFEKSAATWEERFSALERLTTLELLEVRRQQEEERMRKP
PSPEPLPAQDSPRQSGVENGLQNGLPSDQDSPQNGLDRVEIMNGVAEQNSKDPSPIPSPT
ADRRVKGSLSSTLPTQNHDSPVAQLEGFLHRKHEWEGHNKKASSRSWHNVYCVINNQEMG
FYKDNKGAGQGIPYHNAIPISLIGAVCDVAMDYKKKKHVFKLRVADGNEYLFQAKEEEEM
STWIQAILNAGTPDKVSITPSNQSTPASSRAQTLPVTVTLTTESSPGKREKDKEKDKEKR
FSLFGKKKL
NT seq
7050 nt
NT seq
+upstream
nt +downstream
nt
atgacgacagtagccgcggaatatgaacacatggagatcacgcagcagtacagtagcagc
gacacggtcaacagccgctgggatgacgagtgggataatgagaacagctcggctcgcctg
ttcgagcgctcgcgcatcaaggccctggcagatgagcgcgaagcagtgcagaagaagacc
ttcaccaaatgggtgaactctcacctctcccgggtgtcctgccgcatcacggacctgtac
agggacctgagtgatggacgcatgctcatcaaactgctggaggtgctgtctggggagaga
ctgcccaagcccaccaggggacggatgcgtatccactgcctggagaatgtggacaaggcc
ctgcagttcctcaaggagcagagggtccacctggaaaacatgggctcgcatgacatcgtt
gacggcaaccaccgcctcaccctgggcctcatctggaccatcattctcaggttccagatc
caggacatcagcgttgagactgacggagacaacaaggagaagagatcagccaaggacgcc
ctgctcctctggtgccagatgaagactgctggctatccaaacgtgaacattcacaacttc
agcaccagttggcgagacggcatggcattcaatgccctcatccataagcacaggccagac
ctgattgactttgacaagctgaaaaagtctaatgcccaccacaacctgcagaatgccttc
aatttggctgagcagcatctggggcttaccaagctcctggacccagaggatatcagtgtg
gaccaccccgatgagaagtctgtcatcacatacgtggtgacatactaccactacttctcc
aaaatgaaggccctgaaagtcgaggggaaacgtattgggaaggtactggacaatgccatt
gagacagagaagatgattgagaagtacgagtctctggcctcagacctgctggagtggatc
gagcagaccatcatcatcctcaacaatcgcaagtttgccaactctttaaacggggtgcag
cagcagcttcaagccttcaacacatatcgcacggttgagaaaccccctatgtttactgag
aagggcaacctggaggtgcttctgtttaccatccagagcaagatgagggctaacaatcag
aaagtctacatgcccagggagggcaaactcatctctgacattaacaagacctgggagaga
ctggagaaggcggagcatgagcgggagctgtctctgaggacagagctgattcgacaggag
aaactggagcagctggctcgccgctttgaccgcaaggctgccatgagggagacctggttg
agtgagaaccagcgccttgtctcacaggacaactttggctttgaccttccagcggtggac
gcggccaccaagaagcatgaggccatcgagactgatattacagcttacgaggagcgtgtg
caggccgtggtgtccgtcgctaaggagctggaggcagagaaataccacgacatcaaacga
atcgcagcacgcaaggacaatgtgatccggctgtgggagtacctgctggagcttctgaag
tcgaggcgccagcgcctggagatgaacttgggtctgcagagggtcttccaggagatgctt
tacatcatggactggatggacgagatgaagatgatgctactgtcccaggactatgggaag
catctgctcggagtggaggatctcttgcagaaacatgccctggtggaggctgacatcggc
atccaggccgaccgagtcaaagctgtcaacaacaatgctcagaagtttgccatcgatggc
gatgtttacaagccctgtgaccctcaggtgatacgcgaccgcgtggcacacatggagttc
tgctatcaggaactgacccagctggctgccgagcgacgggcccgcctggaggagtctcac
cgcctctggaagttcttctgggagatggccgaggaggagggctggatccatgagaaggag
cagatcctgtcgtcggacgagagcggcagggacctgacgggcactgtgcgcctgctaagc
cagcaccgcaccctggaggacgagatgagtggccgtgcaggtcacctgcagcacaccatt
actgagggccaggccatggccgacggcggccacttcggcgctgccaagatccgtgaacgc
atcaccaaccagcgggcgcagtgggcagcgttggaggagctggcggccgtgaggaaggcc
catctggaggaagcgtatgccctgcaccagttccaggcggatgcagatgacgccgacgcc
tggaccctggatgccctgcgcatcgtgtccagtggcgaggtgggccatgacgagttctcc
acacaggccctggtgcgcaaacacaaggacgccgccgccgaggtggccagctatcggccg
gtgatagatgcgctccatgagcaggcgggcgccttgcctgaggcgcaggtccagtcggaa
caggtcaagggccgtttggcaggcatagaggagcgttacaaggaggtggccgagctgacc
cggtttagaaagcaggcactgcaggacgccctggccctctacaagatgttcagcgaggcg
gacgcctgcgagatgtggatcaatgagaaggagcagtggctcaacagtatggagatccca
gagaagctggaagacctagaggtcatacagcacaggttcgagagcctggagcctgagatg
aacaaccaggcatcacgcgtcgctgttgtgaaccagatcgccaggcagctgatgcacaat
ggacaccccagtgagaagaacatcaaagcccagcaagataagctcaacaacagatggagc
cagttccgggatctggcagaccagaagaaggagtctctaatctcggcgctgggtgtgcag
aactaccacctggactgcaacgaaactaagtcatggatccgcgagaagacgaaggtcatc
gagtccacccaggagctgggcaacgacctgacgggtgtcatggcgctgcagcgtaaactc
actggcatggagcgtgacctggctgccatcgaggacaagctgggcgacctgcgcggcgag
gcggagcggctgcccggcgagcacccgaaccaggccaaggccatcaagggccgcctggct
gagatcactgccgtgtgggaggagatgaaggccacactgcgtaatcgcgaggagtccctt
ggagaggccagcaagctgcagcagttcctgcgcgagctggatgacttccagtcgtggctg
tcgcgcacacagacagccgtcgcctcggaggagacgcccaacacgctggccgaggcagag
aagctgctagcgcagcacgagggcatcaagaacgagatccgcaactacgaggaggactac
cagaagatgcgcgacatgggtgagatggtgacccagggccagaccgatgcccagtacatg
ttcctgaggcagcggttacaggccctggacacgggctggaatgagctgcacaagatgtgg
gaaaaccggcagaacctgctatcccagtcccacgcctaccaactgtttctcagggacacc
acgcaggccgaggccttcctcaacaaccaggaatacatgctggcccatacagagatggcc
actacgcttgagggggccgaaggagccatcaagaagcaggaggacttcatgaccacaatg
gacgccaacgaagagaagatcaacagtgtggtggaggctggcaggcggctggcgagtgat
ggcaacatcaacgccgaccgcatccaggagagagcggcgtctattgacgacagacataag
aagaaccgcaaggctgctctggagctactgatgaggctgaaggataaccgggcgcttcag
aagttcctacaggattcccaggagctgtccctgtggatcaatgagaagatgctcacggcc
caggacatgtcgtacgacgaggccaggaatctccacagcaaatggctcaagcatcaggcc
ttcatggccgagctgcagtccaacaaggagtggctggacaaaattgagaaggatgggatg
cagctggtgttagagaagcctgagacagagtcggtggtcaaggagaagctctcagccctc
cagaagatgtgggaagtgttggagtctaccacccagaccaaagcccagtgcctgtttgac
gccaacaagaccgagctgttcacacagagctgtgctgacttggacaagtggctgggtggc
ctggagggacagattcaatctgatgactatggcaaagacctgaccagcgtcaatatcctg
ctcaaaaagcagcagatattggagaatcaggtggaggtccgtcagagggaggtggtggag
ctgcagagccaggcactggtcctcagccaggaagggaatgtcacagaggaggtggattgc
cagagacacatggtggagcacaagttcaaagagctgctcgacccgctgaggaagagaaag
aacttcctggtggcctcccgtgagatccaccagttcaaccgcgacgtggaggatgagata
ctttgggtcgaagagaggatgccaattgcaacctccacagagcatggtcacaacctacag
accgttcaactgcttatcaagaaaaatcagaccttgcagaaggagatccagggacaccag
ccccgcttcgacgacattttcgagcggagcgagagcctgctgatggaggacagccttgcc
ggggaggccatccgccagcacctggctgacctgcaacagctgtggggtctgatgattgag
gagacagagaagcgtcacgcccgactggagcagtcccacaacgcccagaagtactacttt
gatgccgccgaggcagaggcctggatgagcgagcaggagttgtacatgatgtctgaggag
aaagccaaggatgagcagagctctgtagccatgctgaagaagcaccagattgtggaacaa
tcggtggaggactacgctgagacagtccatcagctctccaagaccagcagaggcctgaca
gctgcaggacatacagagagtgagaggataggcatgcgtcagtctcaggtggacaagctc
tatgccggcatgaaggacctgtctgaggagaggcggggcaaactggatgagaggttccgc
ctgttccagctcaaccgcgaggttgacgacttggagcagtggattgccgagcgggaggtg
gtggccggatctcacgagctgggacaagactacgagcatgtcactatgctccaggagcgc
tttcgggagttttcccgtgacacagacaacatcggccaggagcgtgtggatgccgtcaac
cgcctgtccgacgagctgattaatgcgggccacgcagatgccgccacggtggctgagtgg
aaggacggcctcaacgaggcctgggctgacctgctggagctcatcgacacacgcacgcag
atactggccgcctcttacgagctacacaagttctaccacgacgccaaggagatcctgggc
cgcatcatggacaaacacaagaagcttcccgaggaggtgggacgtgaccagaacacagtg
gagacactgcagcggatgcacaccactttcgagcacgacatccaggccctgggaacacag
gtgaggcagctgcaggaggatgccgtccgcctccagtcagcctacgccggcgacaaggca
gacgacatccagcggagggagagcgaggtgctggaggcctggaataccctgctggagtcc
tgcgatgtccgcagaggccacctcctggacacgggtgacaaatttcacttcttcagcatg
gtgcgcgatctcatgctgtggatggaggacgtcatccgtctcatcgaagcccaggagaat
ccaagggacgtgtcctctgtggagttgttgatgaacaaccaccagggtatcaaggctgag
atcgacgcccgcaatgacagcttcaccgcctgcattgagttgggcaagtctctgctagcc
agaaagcactatgcatcagaggagatcaaagataaattactacagctgatggacaagagg
aaagacatgattgacaagtgggaggaccgacgggagtggttaagactgattttggaagtt
caccagtttgggagggatgcaggggtggcagaggcgtggctgctgggacaggaaccatac
ctgtttggcccggagttggggcagagcgtggacgaagtggagaaactgatcaagaggcac
gaggcttttgagaagtcggccgctacttgggaggagcgcttctcagcactggagaggttg
actacgttggagttattggaagtgagaagacagcaagaggaagagaggatgcgaaaaccc
ccttcgccggagcctttaccggcgcaggactcaccacggcagagtggagtagagaacgga
ctgcagaacggactgccctcagaccaggattctccacagaacggcttggatagagttgag
atcatgaatggagtggcggagcagaactcaaaggacccgagccccattccctcacccaca
gccgaccggcgggtcaagggcagcctgtcctccacgttgccgacccagaaccacgattcg
cctgtggctcagctggagggcttcctgcatcgcaagcatgaatgggagggacacaacaag
aaggcctcaagcagatcatggcataacgtgtactgcgttatcaacaatcaggaaatgggc
ttctacaaagacaacaagggtgctggtcaaggcatcccctaccataatgcgattccgatc
agtctaatcggggctgtgtgtgatgtggccatggactacaaaaaaaagaagcatgtcttc
aaactcagagttgctgatggaaatgagtatctcttccaagccaaagaagaggaggagatg
agcacatggatccaggccattctgaacgcggggacacctgacaaggtatcgattacgccc
agcaaccagagcactccggcgtcgagccgagcccagaccctgcccgtcactgtcaccctc
accaccgaatccagcccgggcaagcgggagaaagacaaggaaaaggacaaggagaagcga
ttcagcctctttggcaagaaaaaactataa
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integrated database retrieval system
